RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 OR1N2Q8NGR9 330 aa3.38□□□□□ -1.87
NPM1-206ENST00000519955 MARCH1Q8TCQ1 289 aa3.38□□□□□ -1.87
NPM1-206ENST00000519955 ACER1Q8TDN7 264 aa3.38□□□□□ -1.87
NPM1-206ENST00000519955 PYROXD1Q8WU10 500 aa3.38□□□□□ -1.87
NPM1-206ENST00000519955 FGF14Q92915 247 aa3.38□□□□□ -1.87
NPM1-206ENST00000519955 ZNF641Q96N77 438 aaPredicted RBP3.38□□□□□ -1.87
NPM1-206ENST00000519955 PSKH2Q96QS6 385 aa3.38□□□□□ -1.87
NPM1-206ENST00000519955 STOX2Q9P2F5 926 aaPredicted RBP3.38□□□□□ -1.87
NPM1-206ENST00000519955 PIGLQ9Y2B2 252 aa3.38□□□□□ -1.87
NPM1-206ENST00000519955 CLRN2A0PK11 232 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 LAD1O00515 517 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 TOM1O60784 492 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 PRB2P02812 416 aaPredicted RBP3.37□□□□□ -1.87
NPM1-206ENST00000519955 IGKV3-11P04433 115 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 ZNF32P17041 273 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 ARFIP1P53367 373 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 UBE2HP62256 183 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 OGDHQ02218 1023 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 SCRN3Q0VDG4 424 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 DGUOKQ16854 277 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 ENPP6Q6UWR7 440 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 ZNF621Q6ZSS3 439 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 OR4F15Q8NGB8 312 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 MCOLN3Q8TDD5 553 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 PELOQ9BRX2 385 aaKnown RBP3.37□□□□□ -1.87
NPM1-206ENST00000519955 AZI2Q9H6S1 392 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 NIPAL2Q9H841 368 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 LY9Q9HBG7 655 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 MMP17Q9ULZ9 603 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 CLEC4AQ9UMR7 237 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 TRAPPC4Q9Y296 219 aa3.37□□□□□ -1.87
NPM1-206ENST00000519955 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.36□□□□□ -1.87
NPM1-206ENST00000519955 SNTNA6NMZ2 147 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 RTL8CO15255 209 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 TIMM8AO60220 97 aaPredicted RBP3.36□□□□□ -1.87
NPM1-206ENST00000519955 TSPAN12O95859 305 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 PTMSP20962 102 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 BTCP35070 178 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 EPS15P42566 896 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 PPOXP50336 477 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 SUCLG1P53597 346 aaKnown RBP3.36□□□□□ -1.87
NPM1-206ENST00000519955 AIF1P55008 147 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 ACTR1AP61163 376 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 ACVR1Q04771 509 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 LRRC63Q05C16 580 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 PSG5Q15238 335 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 RFX4Q33E94 735 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 PIGGQ5H8A4 983 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 TMEM255AQ5JRV8 349 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 CCDC54Q8NEL0 328 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 VN1R2Q8NFZ6 395 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 DTX3LQ8TDB6 740 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 SLC17A9Q9BYT1 436 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 NT5C3AQ9H0P0 336 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 LRRC40Q9H9A6 602 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 MRPL47Q9HD33 250 aaKnown RBP3.36□□□□□ -1.87
NPM1-206ENST00000519955 CALYQ9NYX4 217 aa3.36□□□□□ -1.87
NPM1-206ENST00000519955 ZNF223Q9UK11 482 aaPredicted RBP3.36□□□□□ -1.87
NPM1-206ENST00000519955 MAGEB4O15481 346 aaPredicted RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 RIPK2O43353 540 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 CD1CP29017 333 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 NMUP48645 174 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 CCR6P51684 374 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 PDIA2Q13087 525 aaKnown RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 KCTD19Q17RG1 926 aaPredicted RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 TSPO2Q5TGU0 170 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 CASC1Q6TDU7 716 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 RGS9BPQ6ZS82 235 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 EFL1Q7Z2Z2 1120 aaKnown RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 LINC01551Q86U37 167 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 PIANPQ8IYJ0 282 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 ZNF679Q8IYX0 411 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 TBC1D21Q8IYX1 336 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 ZCCHC7Q8N3Z6 543 aaKnown RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 BHLHE23Q8NDY6 225 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 DUSP18Q8NEJ0 188 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 OR2G3Q8NGZ4 309 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 TMEM158Q8WZ71 300 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.35□□□□□ -1.87
NPM1-206ENST00000519955 ECSITQ9BQ95 431 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 HDHD3Q9BSH5 251 aaPredicted RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 CLMPQ9H6B4 373 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 SGK2Q9HBY8 427 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 DMAP1Q9NPF5 467 aaPredicted RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 EXD2Q9NVH0 621 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 ZNF226Q9NYT6 803 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 DEC1Q9P2X7 70 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 XCL2Q9UBD3 114 aa3.35□□□□□ -1.87
NPM1-206ENST00000519955 PHF3Q92576 2039 aaKnown RBP3.35□□□□□ -1.87
NPM1-206ENST00000519955 TMX2-CTNND1H3BSU7 103 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 PEX7O00628 323 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 SNAI2O43623 268 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 FCMRO60667 390 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 IL1BP01584 269 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 FGF1P05230 155 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 PLEKP08567 350 aaPredicted RBP3.34□□□□□ -1.87
NPM1-206ENST00000519955 FDFT1P37268 417 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 MRPL28Q13084 256 aaKnown RBP3.34□□□□□ -1.87
NPM1-206ENST00000519955 TFDP3Q5H9I0 405 aa3.34□□□□□ -1.87
NPM1-206ENST00000519955 CENPPQ6IPU0 288 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms