RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 LIN52Q52LA3 116 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 COX20Q5RI15 118 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 NCMAPQ5T1S8 102 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 PRAMEF8Q5VWM4 474 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 PRAMEF7Q5VXH5 474 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 TMPPEQ6ZT21 453 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 Q71RC1 249 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 SSX8Q7RTT4 187 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 ZNF619Q8N2I2 560 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 TSPAN14Q8NG11 270 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 XAGE5Q8WWM1 108 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 CYGBQ8WWM9 190 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 AKAP1Q92667 903 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 KISS1RQ969F8 398 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 DGCR14Q96DF8 476 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 HSH2DQ96JZ2 352 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 ZNF607Q96SK3 696 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 EPYCQ99645 322 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 POTEKPQ9BYX7 375 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 QRSL1Q9H0R6 528 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 EXOSC3Q9NQT5 275 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 FAM32AQ9Y421 112 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 RNF115Q9Y4L5 304 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 SPIN1Q9Y657 262 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 HSPE1-MOB4S4R3N1 261 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 USF3Q68DE3 2245 aa11.03□□□□□ -0.64
TRAPPC9-206ENST00000519482 TRIM64A6NGJ6 449 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 ZNF814B7Z6K7 855 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 SULT2B1O00204 365 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 CNOT4O95628 575 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 SNAP29O95721 258 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 LY6G6DO95868 133 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 CD3EP07766 207 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 CLK1P49759 484 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 DIO1P49895 249 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 HMGA2P52926 109 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 CASP9P55211 416 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 HPCAP84074 193 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 TSC22D1Q15714 1073 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 MAPK14Q16539 360 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 IQCCQ4KMZ1 466 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 SYT14P1Q58G82 188 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 TNFAIP8L2Q6P589 184 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 FRRS1Q6ZNA5 592 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 BHLHA15Q7RTS1 189 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 OLIG3Q7RTU3 272 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 THAP5Q7Z6K1 395 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 GALNT5Q7Z7M9 940 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 CIARTQ8N365 385 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 NFKBIDQ8NI38 313 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 ZNF563Q8TA94 476 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 ADAMTS16Q8TE57 1224 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 GEMIN6Q8WXD5 167 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 RAB8BQ92930 207 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 TPD52L3Q96J77 140 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 BCL2L10Q9HD36 194 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 FAM118AQ9NWS6 357 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 EMC3Q9P0I2 261 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 LIPT1Q9Y234 373 aa11.02□□□□□ -0.65
TRAPPC9-206ENST00000519482 CADP27708 2225 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 IGKV3D-15A0A087WSY6 115 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 TRIM64CA6NLI5 447 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 HMGN4O00479 90 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 DNPH1O43598 174 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 FESP07332 822 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 ANXA8P13928 327 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 RYKP34925 604 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 SH3BGRP55822 239 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 SMIM11AP58511 58 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 RPS4XP62701 263 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 CSNK2BP67870 215 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 FUT5Q11128 374 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 GPAT3Q53EU6 434 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 RBM48Q5RL73 367 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 ALKBH2Q6NS38 261 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 GRINAQ7Z429 371 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 P2RY8Q86VZ1 359 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 KRT73Q86Y46 540 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 CMIPQ8IY22 773 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 C8orf59Q8N0T1 100 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 SETD9Q8NE22 299 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 LILRB1Q8NHL6 650 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 SLC38A5Q8WUX1 472 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 PMM1Q92871 262 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 MAL2Q969L2 176 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 FBXW5Q969U6 566 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 ZHX1-C8orf76Q96EF9 292 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 ZNF300Q96RE9 604 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 CALML5Q9NZT1 146 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 CHRNA9Q9UGM1 479 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 PRSS50Q9UI38 385 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 LAMP3Q9UQV4 416 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 HDGFL3Q9Y3E1 203 aa11.01□□□□□ -0.65
TRAPPC9-206ENST00000519482 A0A0G2JPF8 293 aa11□□□□□ -0.65
TRAPPC9-206ENST00000519482 PRAMEF27A3QJZ7 478 aa11□□□□□ -0.65
TRAPPC9-206ENST00000519482 TRIM64BA6NI03 449 aa11□□□□□ -0.65
TRAPPC9-206ENST00000519482 TMEM229AB2RXF0 380 aa11□□□□□ -0.65
TRAPPC9-206ENST00000519482 HNRNPCL2B2RXH8 293 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms