RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 THTPAQ9BU02 230 aa19.4■□□□□ 0.7
VEGFA-217ENST00000518538 NMNAT1Q9HAN9 279 aaPredicted RBP19.4■□□□□ 0.7
VEGFA-217ENST00000518538 RASSF1Q9NS23 344 aa19.4■□□□□ 0.7
VEGFA-217ENST00000518538 TAS2R16Q9NYV7 291 aa19.4■□□□□ 0.7
VEGFA-217ENST00000518538 NBPF19A0A087WUL8 3843 aa19.4■□□□□ 0.7
VEGFA-217ENST00000518538 OR6C65A6NJZ3 312 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 hCG_2039718K7EN88 272 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 PDLIM1O00151 329 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 GYG2O15488 501 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 AKAP8O43823 692 aaKnown RBP19.39■□□□□ 0.69
VEGFA-217ENST00000518538 PIP5K1CO60331 668 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 OR7A10O76100 309 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 ZNF432O94892 652 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 OR6A2O95222 327 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 THBDP07204 575 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 ADORA3P0DMS8 318 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 HLA-DOBP13765 273 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 ATP6V1B2P21281 511 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 AHCYP23526 432 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 POU3F1Q03052 451 aaPredicted RBP19.39■□□□□ 0.69
VEGFA-217ENST00000518538 ZP4Q12836 540 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 LCN8Q6JVE9 175 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 CYP2R1Q6VVX0 501 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 NANOGNBQ7Z5D8 188 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 ACOT11Q8WXI4 607 aaPredicted RBP19.39■□□□□ 0.69
VEGFA-217ENST00000518538 MCUR1Q96AQ8 359 aa19.39■□□□□ 0.69
VEGFA-217ENST00000518538 SLC7A6OSQ96CW6 309 aaPredicted RBP19.39■□□□□ 0.69
VEGFA-217ENST00000518538 H1F0P07305 194 aaKnown RBP19.38■□□□□ 0.69
VEGFA-217ENST00000518538 ITGA5P08648 1049 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 FUT1P19526 365 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 DNAJA1P31689 397 aaKnown RBP19.38■□□□□ 0.69
VEGFA-217ENST00000518538 BNIP1Q12981 228 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 IQCCQ4KMZ1 466 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 NHLRC1Q6VVB1 395 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 ABHD12BQ7Z5M8 362 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-217ENST00000518538 DHFR2Q86XF0 187 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 RNF113BQ8IZP6 322 aaKnown RBP19.38■□□□□ 0.69
VEGFA-217ENST00000518538 ASB9Q96DX5 294 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 CLPTM1LQ96KA5 538 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 PIP5K1AQ99755 562 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 LINC00470Q9BZP3 86 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 TAS2R5Q9NYW4 299 aa19.38■□□□□ 0.69
VEGFA-217ENST00000518538 A0A1W2PRQ8 180 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 C11orf98E9PRG8 122 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 SLC43A1O75387 559 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 KRT33AO76009 404 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 IFI30P13284 250 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 KRTAP10-9P60411 292 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 MS4A2Q01362 244 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 DGCR6Q14129 220 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 ZNF730Q6ZMV8 503 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 NRMQ8IXM6 262 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 ANKK1Q8NFD2 765 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 HSD17B8Q92506 261 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 CCDC124Q96CT7 223 aaKnown RBP19.37■□□□□ 0.69
VEGFA-217ENST00000518538 BPIFA2Q96DR5 249 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 DHRS1Q96LJ7 313 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 LURAP1Q96LR2 239 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 OR2M2Q96R28 347 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 BTBD10Q9BSF8 475 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 POLDIP3Q9BY77 421 aaKnown RBP19.37■□□□□ 0.69
VEGFA-217ENST00000518538 CLEC4MQ9H2X3 399 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-217ENST00000518538 IL1RAPQ9NPH3 570 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 CACNA1DQ01668 2161 aa19.37■□□□□ 0.69
VEGFA-217ENST00000518538 A0A087WUU8 490 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 TCRBV5S2A0A599 114 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 CIB4A0PJX0 185 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 DEFB108AA8MXU0 73 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 RNF13O43567 381 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 RAD51DO75771 328 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 DIRAS1O95057 198 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 HRGP04196 525 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 FABP3P05413 133 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 MPGP29372 298 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 FOXG1P55316 489 aaPredicted RBP19.36■□□□□ 0.69
VEGFA-217ENST00000518538 LSM11P83369 360 aaKnown RBP eCLIP19.36■□□□□ 0.692e-28■□□□□ 10.6
VEGFA-217ENST00000518538 PRKCDQ05655 676 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 TAB1Q15750 504 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 FBXW10Q5XX13 1052 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 MBOAT2Q6ZWT7 520 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 P2RY8Q86VZ1 359 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 TMEM123Q8N131 208 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 SLC7A13Q8TCU3 470 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 POP5Q969H6 163 aaKnown RBP19.36■□□□□ 0.69
VEGFA-217ENST00000518538 MED29Q9NX70 200 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 FBN2P35556 2912 aa19.36■□□□□ 0.69
VEGFA-217ENST00000518538 ZNF587BE7ETH6 402 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 BLOC1S5-TXNDC5H3BN57 136 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 SIAH2O43255 324 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 SERPINI2O75830 405 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 TSPAN19P0C672 248 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 TGFBR3Q03167 851 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 LGALS3BPQ08380 585 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 TIMM23BQ5SRD1 257 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 OR7E24Q6IFN5 339 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 RRM2BQ7LG56 351 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 SSX8Q7RTT4 187 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 WFDC8Q8IUA0 241 aa19.35■□□□□ 0.69
VEGFA-217ENST00000518538 C1orf162Q8NEQ5 155 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-217ENST00000518538 TXNDC15Q96J42 360 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms