RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LNP1A1A4G5 178 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 RIIAD1A6NNX1 92 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 FLRT2O43155 660 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 LANCL1O43813 399 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 GPRIN2O60269 458 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 IFNGP01579 166 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 IFNA16P05015 189 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ZNF806P0C7X5 589 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 UBL4AP11441 157 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 CPN1P15169 458 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 GPR4P46093 362 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 SNTB2Q13425 540 aaKnown RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 KLF9Q13886 244 aaPredicted RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 MFSD13AQ14CX5 517 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 AANATQ16613 207 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 UBE2NLQ5JXB2 153 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 PLBD1Q6P4A8 553 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 FIGNL1Q6PIW4 674 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 SHISA5Q8N114 240 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ZNF527Q8NB42 609 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 DPYSL5Q9BPU6 564 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 COL25A1Q9BXS0 654 aaPredicted RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 RBCK1Q9BYM8 510 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ZNF436Q9C0F3 470 aaPredicted RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 PPA2Q9H2U2 334 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ZNF768Q9H5H4 540 aaKnown RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 TMEM27Q9HBJ8 222 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 CTPS2Q9NRF8 586 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 LANCL2Q9NS86 450 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 KCNE5Q9UJ90 142 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 SESN1Q9Y6P5 492 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 TRAV6A0A075B6T7 132 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ARPC4-TTLL3A0A0A6YYG9 625 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 A0A1W2PQM1 296 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 I3L521 148 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 CH25HO95992 272 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 SBK2P0C263 348 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 MNDAP41218 407 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 GRK6P43250 576 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 GBX2P52951 348 aaPredicted RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 LSM11P83369 360 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDC2-202ENST00000518385 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDC2-202ENST00000518385 ACSM3Q53FZ2 586 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ARL9Q6T311 187 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 SEZ6L2Q6UXD5 910 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ZNF574Q6ZN55 896 aaPredicted RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 TTLL10Q6ZVT0 673 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ZNF550Q7Z398 422 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 SIAH3Q8IW03 269 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ZNF615Q8N8J6 731 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 POMGNT2Q8NAT1 580 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 BBS1Q8NFJ9 593 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 IFI44Q8TCB0 444 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 DOK4Q8TEW6 326 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 KISS1RQ969F8 398 aaPredicted RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 TIMP4Q99727 224 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 UTP23Q9BRU9 249 aaKnown RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 TRIM2Q9C040 744 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 ISG20L2Q9H9L3 353 aaKnown RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 FBXO34Q9NWN3 711 aa16.72■□□□□ 0.27
SDC2-202ENST00000518385 SIDT1Q9NXL6 827 aaKnown RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 TMEM184BQ9Y519 407 aaPredicted RBP16.72■□□□□ 0.27
SDC2-202ENST00000518385 SCN2AQ99250 2005 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 ZNF879B4DU55 563 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 PEX12O00623 359 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 ANKRD34CP0C6C1 535 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 TFPIP10646 304 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 ZNF3P17036 446 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 GIFP27352 417 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 CCR9P51686 369 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 EXOSC2Q13868 293 aaKnown RBP16.71■□□□□ 0.27
SDC2-202ENST00000518385 ERV3-1Q14264 604 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 OR1Q1Q15612 314 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 LGALSLQ3ZCW2 172 aaPredicted RBP16.71■□□□□ 0.27
SDC2-202ENST00000518385 TMPRSS9Q7Z410 1059 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 GPAT4Q86UL3 456 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 SLC38A6Q8IZM9 456 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 OR10H4Q8NGA5 316 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 OR1L3Q8NH93 324 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 GIMAP1Q8WWP7 306 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 PTCHD1Q96NR3 888 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 TEAD3Q99594 435 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 ATXN7L1Q9ULK2 861 aaPredicted RBP16.71■□□□□ 0.27
SDC2-202ENST00000518385 SLC7A7Q9UM01 511 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 PRELID1Q9Y255 219 aa16.71■□□□□ 0.27
SDC2-202ENST00000518385 TRABD2BA6NFA1 517 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 NPIPB9F8W1W9 429 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 M0R233 179 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 SSNA1O43805 119 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 CDC123O75794 336 aaPredicted RBP16.7■□□□□ 0.26
SDC2-202ENST00000518385 LDOC1O95751 146 aaPredicted RBP16.7■□□□□ 0.26
SDC2-202ENST00000518385 THY1P04216 161 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 IL5P05113 134 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 GIPP09681 153 aaPredicted RBP16.7■□□□□ 0.26
SDC2-202ENST00000518385 UCHL1P09936 223 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 IFI30P13284 250 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 MAOAP21397 527 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 SLC2A5P22732 501 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 ZNF81P51508 661 aa16.7■□□□□ 0.26
SDC2-202ENST00000518385 MECP2P51608 486 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms