RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 CARM1Q86X55 608 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 C3orf56Q8N813 242 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 PIK3C3Q8NEB9 887 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 CLDND2Q8NHS1 167 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 TMEM186Q96B77 213 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 KTI12Q96EK9 354 aaPredicted RBP13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 OXGR1Q96P68 337 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SORT1Q99523 831 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 PTDSS2Q9BVG9 487 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MRPL37Q9BZE1 423 aaKnown RBP13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ARMC7Q9H6L4 198 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 PNPOQ9NVS9 261 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 AIG1Q9NVV5 245 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 RPS6KB2Q9UBS0 482 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 FZR1Q9UM11 496 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 GRIP1Q9Y3R0 1128 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 DSPPQ9NZW4 1301 aa13.13□□□□□ -0.31
CSGALNACT1-204ENST00000517494 TMEM247A6NEH6 219 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 RPL36A-HNRNPH2H7BZ11 118 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 M0R082 166 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SYNGR3O43761 229 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 AKAP8O43823 692 aaKnown RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF432O94892 652 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 NR4A1P22736 598 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 LRRC74AQ0VAA2 488 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MAD2L1BPQ15013 274 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ELFN2Q5R3F8 820 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 IL17RDQ8NFM7 739 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SEMA6DQ8NFY4 1073 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF417Q8TAU3 575 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 RNF217Q8TC41 542 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF418Q8TF45 676 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MRPL24Q96A35 216 aaKnown RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 TMEM19Q96HH6 336 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 LRRC37BQ96QE4 947 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 OR2M2Q96R28 347 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF587Q96SQ5 575 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SPATA9Q9BWV2 254 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ROPN1BQ9BZX4 212 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MEAF6Q9HAF1 191 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ROPN1Q9HAT0 212 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SLC6A13Q9NSD5 602 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 TREM2Q9NZC2 230 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 B3GAT1Q9P2W7 334 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SPEF1Q9Y4P9 236 aa13.12□□□□□ -0.31
CSGALNACT1-204ENST00000517494 A0A1W2PPW3 197 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF99A8MXY4 864 aaPredicted RBP13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 FAM157AC9JC47 383 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 AIM2O14862 343 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 BIRC5O15392 142 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 HPXP02790 462 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MSMBP08118 114 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 NQO1P15559 274 aaKnown RBP13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 COL8A2P25067 703 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 GRPRP30550 384 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 PTDSS1P48651 473 aaKnown RBP13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SEC24CP53992 1094 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 GALK2Q01415 458 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 EGR4Q05215 589 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MSMPQ1L6U9 139 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 GSG1Q2KHT4 349 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 PHYHD1Q5SRE7 291 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 FAHD2BQ6P2I3 314 aaPredicted RBP13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 CCDC36Q8IYA8 594 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ANKK1Q8NFD2 765 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MGARPQ8TDB4 240 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 FAHD2AQ96GK7 314 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 PAIP2Q9BPZ3 127 aaKnown RBP13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 MS4A5Q9H3V2 200 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 CHST2Q9Y4C5 530 aa13.11□□□□□ -0.31
CSGALNACT1-204ENST00000517494 A0A0A6YYJ9 748 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SLCO1B7G3V0H7 640 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 WNT9BO14905 357 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 AQP5P55064 265 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 STX3Q13277 289 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ALKBH6Q3KRA9 238 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 KRT71Q3SY84 523 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 GTDC1Q4AE62 458 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 SLC9B1Q4ZJI4 515 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 NXNQ6DKJ4 435 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 OGFOD2Q6N063 350 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZNF813Q6ZN06 617 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 LRP11Q86VZ4 500 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 UEVLDQ8IX04 471 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 KIRREL3Q8IZU9 778 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 OR51F2Q8NH61 342 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 ZFAND2BQ8WV99 257 aa13.1□□□□□ -0.31
CSGALNACT1-204ENST00000517494 RDH5Q92781 318 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms