RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 LINC01387J3KSC0 135 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 APOC1P02654 83 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 SRMP19623 302 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 DLSTP36957 453 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 P2RX1P51575 399 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 SIRPAP78324 504 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 PON3Q15166 354 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 ZIC1Q15915 447 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 PAN3Q58A45 887 aaKnown RBP8.86□□□□□ -0.99
VCAN-210ENST00000513960 OR7E24Q6IFN5 339 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 SLC48A1Q6P1K1 146 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 RD3Q7Z3Z2 195 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 ZNF676Q8N7Q3 588 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 ZNF485Q8NCK3 441 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 OR2AK2Q8NG84 335 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 OR4E2Q8NGC2 313 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 KXD1Q9BQD3 176 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 SLC38A1Q9H2H9 487 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 ZMAT3Q9HA38 289 aaKnown RBP8.86□□□□□ -0.99
VCAN-210ENST00000513960 TMEM27Q9HBJ8 222 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 C14orf105Q9NVL8 296 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 SPHK1Q9NYA1 384 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 TAS2R5Q9NYW4 299 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 HEBP2Q9Y5Z4 205 aa8.86□□□□□ -0.99
VCAN-210ENST00000513960 A0A0G2JK05 382 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 SIGLEC6O43699 453 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 RNGTTO60942 597 aaKnown RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 TMIGD3P0DMS9 266 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 CCR4P51679 360 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 DECR1Q16698 335 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 OTPQ5XKR4 325 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ZNF660Q6AZW8 331 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 HSD17B13Q7Z5P4 300 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 CMIPQ8IY22 773 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 MUC20Q8N307 709 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 COX18Q8N8Q8 333 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 THEM6Q8WUY1 208 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 CNN2Q99439 309 aaKnown RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 VRK1Q99986 396 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 APOOQ9BUR5 198 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 AICDAQ9GZX7 198 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 C6orf106Q9H6K1 298 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 NIT2Q9NQR4 276 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ZNF443Q9Y2A4 671 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 C5orf51A6NDU8 294 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 TMEM200CA6NKL6 621 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 A8MXK9 166 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 SELENOFO60613 162 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 FGF2P09038 288 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ITPRIPL2Q3MIP1 535 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 C2orf27AQ580R0 203 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 SLC35F2Q8IXU6 374 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 C7orf61Q8IZ16 206 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 STEAP2Q8NFT2 490 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 NSMAFQ92636 917 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 DMRTA2Q96SC8 542 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 SARGQ9BW04 601 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ANKRD19PQ9H560 264 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 OPN4Q9UHM6 478 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 SLC17A4Q9Y2C5 497 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 IER3IP1Q9Y5U9 82 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ELOA3DA6NLF2 546 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 M0QYG6 137 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 PLPP2O43688 288 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 F3P13726 295 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 FCARP24071 287 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 H2BFSP57053 126 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 TAS2R20P59543 309 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ACTC1P68032 377 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ACTA1P68133 377 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ZNF85Q03923 595 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 FUT5Q11128 374 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 RBM39Q14498 530 aaKnown RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 RBMS2Q15434 407 aaKnown RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 ELOA3BQ3SY89 546 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 PRRT3Q5FWE3 981 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 MRM1Q6IN84 353 aaKnown RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 H3F3CQ6NXT2 135 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 NRROSQ86YC3 692 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 PM20D2Q8IYS1 436 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ELOA3Q8NG57 546 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 OR5M9Q8NGP3 310 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 NR4A3Q92570 626 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 ZNF230Q9UIE0 474 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 ING1Q9UK53 422 aaPredicted RBP8.85□□□□□ -0.99
VCAN-210ENST00000513960 FBXO4Q9UKT5 387 aa8.85□□□□□ -0.99
VCAN-210ENST00000513960 NUP210Q8TEM1 1887 aaPredicted RBP8.84□□□□□ -0.99
VCAN-210ENST00000513960 ALPK3Q96L96 1907 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 ATG2BQ96BY7 2078 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 TRAPPC13A5PLN9 417 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 DUXAA6NLW8 204 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 G3V3Q6 166 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 KCNAB3O43448 404 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 HLA-DQA2P01906 255 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 OR8G3PP0DMU2 310 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 VSIG10L2P0DP72 767 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 NT5EP21589 574 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 MEOX2P50222 304 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 RAG2P55895 527 aa8.84□□□□□ -0.99
VCAN-210ENST00000513960 DUSP2Q05923 314 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms