RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.31□□□□□ -0.28
NUP54-213ENST00000513352 NUFIP2Q7Z417 695 aaKnown RBP13.31□□□□□ -0.28
NUP54-213ENST00000513352 GALNT5Q7Z7M9 940 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 IGFN1Q86VF2 1251 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 ATG16L2Q8NAA4 619 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 MOSPD2Q8NHP6 518 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 FANK1Q8TC84 345 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 ASB5Q8WWX0 329 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 LIPHQ8WWY8 451 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 TNFRSF13CQ96RJ3 184 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 FEVQ99581 238 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 GPA33Q99795 319 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 ZNF556Q9HAH1 456 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 NTN4Q9HB63 628 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 GP6Q9HCN6 339 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 INIPQ9NRY2 104 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 NOX1Q9Y5S8 564 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 FLVCR1Q9Y5Y0 555 aa13.31□□□□□ -0.28
NUP54-213ENST00000513352 NCOA6Q14686 2063 aaPredicted RBP13.31□□□□□ -0.28
NUP54-213ENST00000513352 IGKV3D-15A0A087WSY6 115 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 A0A1W2PRG6 482 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 ZNF724A8MTY0 619 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 MCIDASD6RGH6 385 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 G3V2T6 193 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
NUP54-213ENST00000513352 GASTP01350 101 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 HLA-DOBP13765 273 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 UQCRC1P31930 480 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 KIR2DL2P43627 348 aaPredicted RBP13.3□□□□□ -0.28
NUP54-213ENST00000513352 SLC16A1P53985 500 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 CLDN17P56750 224 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 TOP3AQ13472 1001 aaPredicted RBP13.3□□□□□ -0.28
NUP54-213ENST00000513352 ALG10Q5BKT4 473 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 AAED1Q7RTV5 226 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 STK32CQ86UX6 486 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 HIPK1Q86Z02 1210 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 ZDHHC13Q8IUH4 622 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 ZNF100Q8IYN0 542 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 PQLC1Q8N2U9 271 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 SVOPLQ8N434 492 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 ANKK1Q8NFD2 765 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 OR6K3Q8NGY3 331 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 CA5BP1Q8WTZ4 195 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 ZNF385AQ96PM9 386 aaKnown RBP13.3□□□□□ -0.28
NUP54-213ENST00000513352 BCO1Q9HAY6 547 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 MCCC2Q9HCC0 563 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 TAS2R5Q9NYW4 299 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 B3GAT1Q9P2W7 334 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 ING1Q9UK53 422 aaPredicted RBP13.3□□□□□ -0.28
NUP54-213ENST00000513352 OAZ3Q9UMX2 235 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 PROCRQ9UNN8 238 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 MAGED1Q9Y5V3 778 aaPredicted RBP13.3□□□□□ -0.28
NUP54-213ENST00000513352 MYO18BQ8IUG5 2567 aa13.3□□□□□ -0.28
NUP54-213ENST00000513352 ARRDC5A6NEK1 342 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 KLF4O43474 513 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 MRPL33O75394 65 aaKnown RBP13.29□□□□□ -0.28
NUP54-213ENST00000513352 TNFSF13O75888 250 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 IL18BPO95998 194 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 ADAP00813 363 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 GSSP48637 474 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 CTXN1P60606 82 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 PRPS1P60891 318 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 ZP4Q12836 540 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 MELKQ14680 651 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 POU4F3Q15319 338 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 GUSBP1Q15486 140 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 ANKDD1AQ495B1 522 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 CARD17Q5XLA6 110 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 ZNF770Q6IQ21 691 aaPredicted RBP13.29□□□□□ -0.28
NUP54-213ENST00000513352 NIPAL3Q6P499 406 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 SMARCD3Q6STE5 483 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 CREB3L2Q70SY1 520 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 SLC35D2Q76EJ3 337 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 BTLAQ7Z6A9 289 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 PXKQ7Z7A4 578 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 LUZP2Q86TE4 346 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 NRBF2Q96F24 287 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 NIPSNAP1Q9BPW8 284 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 UCK2Q9BZX2 261 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 OPN3Q9H1Y3 402 aaPredicted RBP13.29□□□□□ -0.28
NUP54-213ENST00000513352 MED29Q9NX70 200 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 ZNF629Q9UEG4 869 aaPredicted RBP13.29□□□□□ -0.28
NUP54-213ENST00000513352 IL20RAQ9UHF4 553 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 HIF3AQ9Y2N7 669 aa13.29□□□□□ -0.28
NUP54-213ENST00000513352 TRAF3IP2O43734 574 aaPredicted RBP13.28□□□□□ -0.28
NUP54-213ENST00000513352 NDUFB2O95178 105 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 SOX14O95416 240 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 ANXA8P13928 327 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 IFNGR1P15260 489 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 GSTM3P21266 225 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 BIDP55957 195 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 RPS4XP62701 263 aaKnown RBP13.28□□□□□ -0.28
NUP54-213ENST00000513352 XKRXQ6PP77 449 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 EPHX4Q8IUS5 362 aa13.28□□□□□ -0.28
NUP54-213ENST00000513352 LIX1LQ8IVB5 337 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms