RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 NHLRC1Q6VVB1 395 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 DPY19L2P2Q6ZN68 376 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 FCRLAQ7L513 359 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 PXKQ7Z7A4 578 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 CD163Q86VB7 1156 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 KDM8Q8N371 416 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 OR52L1Q8NGH7 329 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 FNDC9Q8TBE3 224 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 TEX47Q8TBZ9 253 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 RNF128Q8TEB7 428 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 SF3B5Q9BWJ5 86 aaKnown RBP11.18□□□□□ -0.62
PDPN-210ENST00000513143 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 GRIP2Q9C0E4 1043 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 NDEL1Q9GZM8 345 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 RIBC2Q9H4K1 309 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 CALHM2Q9HA72 323 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 NRIP3Q9NQ35 241 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 INIPQ9NRY2 104 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 TBC1D23Q9NUY8 699 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 CLCF1Q9UBD9 225 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 IL20RAQ9UHF4 553 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 PHF3Q92576 2039 aaKnown RBP11.18□□□□□ -0.62
PDPN-210ENST00000513143 KALRNO60229 2985 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 NPIPB13A6NJU9 1138 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 CD8B2A6NJW9 211 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 SLC22A20A6NK97 555 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 FIGNL2A6NMB9 653 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 ZAR1LA6NP61 321 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 NPIPB4C9JG80 1138 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 BHLHE40O14503 412 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 PRRG2O14669 202 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 SLC16A6O15403 523 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 SLC19A2O60779 497 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 AQP8O94778 261 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 F13BP05160 661 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 CD14P08571 375 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 HLA-DOBP13765 273 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 APEHP13798 732 aaKnown RBP11.17□□□□□ -0.62
PDPN-210ENST00000513143 RPL4P36578 427 aaKnown RBP11.17□□□□□ -0.62
PDPN-210ENST00000513143 GIPRP48546 466 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 SLC16A1P53985 500 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 CTXN1P60606 82 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 PDK3Q15120 406 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 PTGES3Q15185 160 aaKnown RBP11.17□□□□□ -0.62
PDPN-210ENST00000513143 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 NSUN5P2Q63ZY6 315 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 SLC27A4Q6P1M0 643 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 PLXDC2Q6UX71 529 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 LNX2Q8N448 690 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 ANKK1Q8NFD2 765 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 OR2T33Q8NG76 320 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 TRIB1Q96RU8 372 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 PRRG4Q9BZD6 226 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 SLC25A19Q9HC21 320 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 FAM118AQ9NWS6 357 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 KLHL13Q9P2N7 655 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 ING1Q9UK53 422 aaPredicted RBP11.17□□□□□ -0.62
PDPN-210ENST00000513143 BAIAP2Q9UQB8 552 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 NOX1Q9Y5S8 564 aa11.17□□□□□ -0.62
PDPN-210ENST00000513143 POLEQ07864 2286 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 IGKV3D-15A0A087WSY6 115 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ZNF716A6NP11 495 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 KDM4EB2RXH2 506 aaPredicted RBP11.16□□□□□ -0.62
PDPN-210ENST00000513143 ARPC3O15145 178 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 IDH3BO43837 385 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 TGM6O95932 706 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 IGHMP01871 453 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 FCGR2AP12318 317 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ZNF43P17038 809 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ACVR2AP27037 513 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 HSPA13P48723 471 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 SMSP52788 366 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ADARB1P78563 741 aaKnown RBP11.16□□□□□ -0.62
PDPN-210ENST00000513143 POU3F1Q03052 451 aaPredicted RBP11.16□□□□□ -0.62
PDPN-210ENST00000513143 RASGEF1BQ0VAM2 473 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 GINS1Q14691 196 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 RNPS1Q15287 305 aaKnown RBP11.16□□□□□ -0.62
PDPN-210ENST00000513143 C1orf185Q5T7R7 199 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 SLX4IPQ5VYV7 408 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 TMEM236Q5W0B7 351 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 GTF2IRD2BQ6EKJ0 949 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 RTL6Q6ICC9 239 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ACSM5Q6NUN0 579 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 CREB3L2Q70SY1 520 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 FAM122BQ7Z309 247 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 GPAT4Q86UL3 456 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 GTF2IRD2Q86UP8 949 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 DOLPP1Q86YN1 238 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 UEVLDQ8IX04 471 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 DHRSXQ8N5I4 330 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 OR9K2Q8NGE7 335 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 OR4Q3Q8NH05 313 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ABHD3Q8WU67 409 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 WNT2BQ93097 391 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 KCTD12Q96CX2 325 aaKnown RBP11.16□□□□□ -0.62
PDPN-210ENST00000513143 HRASLS5Q96KN8 279 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 ZNF570Q96NI8 536 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 KATNB1Q9BVA0 655 aa11.16□□□□□ -0.62
PDPN-210ENST00000513143 IFT27Q9BW83 186 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms