RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CACFD1Q9UGQ2 172 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 CCDC88AQ3V6T2 1871 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 TMEM212A6NML5 194 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 HSPB2A8KAH6 182 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 NRG2O14511 850 aaPredicted RBP3.92□□□□□ -1.78
VCAN-209ENST00000513016 CXCL13O43927 109 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 OR7C1O76099 320 aaPredicted RBP3.92□□□□□ -1.78
VCAN-209ENST00000513016 UBL3O95164 117 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 GRPP07492 148 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 FURINP09958 794 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 ARSBP15848 533 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 EMP3P54852 163 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 TFF2Q03403 129 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 KCNAB1Q14722 419 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 HSPB2Q16082 182 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 MBOAT2Q6ZWT7 520 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 ZNF534Q76KX8 674 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 CYB561A3Q8NBI2 242 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 ABHD4Q8TB40 342 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 SGK3Q96BR1 496 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 ALG12Q9BV10 488 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 PBDC1Q9BVG4 233 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 ST6GALNAC5Q9BVH7 336 aa3.92□□□□□ -1.78
VCAN-209ENST00000513016 MYOZ1Q9NP98 299 aaPredicted RBP3.92□□□□□ -1.78
VCAN-209ENST00000513016 IGHV3-20A0A0C4DH32 117 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FRG2CA6NGY1 282 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CD8B2A6NJW9 211 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 A8MXE2 369 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CSF1P09603 554 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CD8BP10966 210 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 NPPBP16860 134 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 GSK3AP49840 483 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SRPXP78539 464 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DYRK1AQ13627 763 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TPBGQ13641 420 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LAPTM4AQ15012 233 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SYPL1Q16563 259 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 COL28A1Q2UY09 1125 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DPY19L2P1Q6NXN4 242 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TMEM108Q6UXF1 575 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RFLNAQ6ZTI6 216 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 KLHDC8BQ8IXV7 354 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CA13Q8N1Q1 262 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 Q8N402 240 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 OR4A16Q8NH70 328 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 NT5CQ8TCD5 201 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 WFDC5Q8TCV5 224 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RAB1CQ92928 201 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SLAMF9Q96A28 289 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TMIGD2Q96BF3 282 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 MS4A6EQ96DS6 147 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DCLRE1CQ96SD1 692 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 GABRG3Q99928 467 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 PRRT1Q99946 306 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 OSBPL7Q9BZF2 842 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SEMA4CQ9C0C4 833 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 MOB1AQ9H8S9 216 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 A0A087WV62 115 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 A0A1B0GWA3 101 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CDHR4A6H8M9 788 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LRIT2A6NDA9 550 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 G3V2L1 256 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 MASP2O00187 686 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 HPP00738 406 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 IFNA4P05014 189 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CD3EP07766 207 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 THBS1P07996 1170 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 H2AFB2P0C5Z0 115 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CAPN3P20807 821 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CD34P28906 385 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RGS19P49795 217 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FAPQ12884 760 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DUSP7Q16829 419 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TATDN3Q17R31 274 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF750Q32MQ0 723 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RPL22L1Q6P5R6 122 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF836Q6ZNA1 936 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FCRLAQ7L513 359 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 MARVELD2Q8N4S9 558 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 TMEM185AQ8NFB2 350 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 AKR1E2Q96JD6 320 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RNF170Q96K19 258 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 LIN7BQ9HAP6 207 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 HRASLSQ9HDD0 168 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 HIF1ANQ9NWT6 349 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SLCO1C1Q9NYB5 712 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 V9GY05 133 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 A0A0U1RQS6 177 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 A0A1W2PPK0 400 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 INMT-MINDY4F8WBC2 141 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SH2D1BO14796 132 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DEGS1O15121 323 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SCAF4O95104 1147 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 OR2T7P0C7T2 308 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 DEFA4P12838 97 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SERPINA2P20848 420 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 BDKRB2P30411 391 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 MEOX1P50221 254 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 FABP6P51161 128 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 IDH3GP51553 393 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms