RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RAP1AP62834 184 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 NUCB2P80303 420 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 HSF2Q03933 536 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ACVR1Q04771 509 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CDC20Q12834 499 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CYTH1Q15438 398 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 SLC15A2Q16348 729 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 KRTAP13-4Q3LI77 160 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CARD16Q5EG05 197 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 TPGS2Q68CL5 300 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 FAM71F2Q6NXP2 309 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CES3Q6UWW8 571 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ISLR2Q6UXK2 745 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CATSPER4Q7RTX7 472 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ACOT1Q86TX2 421 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF573Q86YE8 665 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 MISPQ8IVT2 679 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 LGI3Q8N145 548 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 KDM8Q8N371 416 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 MIR7-3HGQ8N6C7 128 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 OR10A7Q8NGE5 316 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 COL21A1Q96P44 957 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 OXGR1Q96P68 337 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 RNF5Q99942 180 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 NIPSNAP3BQ9BS92 247 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 MRPL13Q9BYD1 178 aaKnown RBP0.82□□□□□ -2.28
PDGFC-208ENST00000512711 IL26Q9NPH9 171 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 SLC17A5Q9NRA2 495 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 IL36GQ9NZH8 169 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 AIPL1Q9NZN9 384 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ZNRD1Q9P1U0 126 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 XCL2Q9UBD3 114 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CD84Q9UIB8 345 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF230Q9UIE0 474 aaPredicted RBP0.82□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF391Q9UJN7 358 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 S4R3C0 116 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 SPAG9O60271 1321 aaKnown RBP0.82□□□□□ -2.28
PDGFC-208ENST00000512711 CEMIPQ8WUJ3 1361 aa0.82□□□□□ -2.28
PDGFC-208ENST00000512711 IGKV1D-13A0A0B4J2D9 117 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 LOC110117498-PIK3R3F6TDL0 507 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 CLDN5O00501 218 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 IGHG4P01861 327 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 H2BFMP0C1H6 154 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 GKN3PP0CG01 181 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 IGKV1-13P0DP09 117 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 POU2F1P14859 743 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 NT5EP21589 574 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 DNAJB1P25685 340 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 RABIFP47224 123 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 P2RY1P47900 373 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 AP3M2P53677 418 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 PKNOX1P55347 436 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF816Q0VGE8 651 aaPredicted RBP0.81□□□□□ -2.28
PDGFC-208ENST00000512711 ASPHQ12797 758 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 MICBQ29980 383 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 TTLL9Q3SXZ7 439 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 RAET1GQ6H3X3 334 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF546Q86UE3 836 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 ZDHHC21Q8IVQ6 265 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 SLC38A6Q8IZM9 456 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 STPG2Q8N412 459 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 ZADH2Q8N4Q0 377 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 OR1N2Q8NGR9 330 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 FGF14Q92915 247 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 TIMM29Q9BSF4 260 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 EDEM2Q9BV94 578 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 TMEM117Q9H0C3 514 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 UGT1A7Q9HAW7 530 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 UGT1A10Q9HAW8 530 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 UGT1A8Q9HAW9 530 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 THUMPD1Q9NXG2 353 aaKnown RBP0.81□□□□□ -2.28
PDGFC-208ENST00000512711 CALYQ9NYX4 217 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 KCNIP1Q9NZI2 227 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 SPATA7Q9P0W8 599 aa0.81□□□□□ -2.28
PDGFC-208ENST00000512711 CIB4A0PJX0 185 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF850A8MQ14 1090 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 LGALS9O00182 355 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 XKRYO14609 159 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 CHADO15335 359 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 LRATO95237 230 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 CSF3P09919 207 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 SLC11A1P49279 550 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 SLC7A9P82251 487 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 LOXL1Q08397 574 aaPredicted RBP0.8□□□□□ -2.28
PDGFC-208ENST00000512711 SAMD4BQ5PRF9 694 aaKnown RBP0.8□□□□□ -2.28
PDGFC-208ENST00000512711 OR52E8Q6IFG1 317 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 KCNIP4Q6PIL6 250 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 SYT10Q6XYQ8 523 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 BIVMQ86UB2 503 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 C14orf79Q96F83 325 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 TEKT3Q9BXF9 490 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 LHX5Q9H2C1 402 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 RBKSQ9H477 322 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 TM9SF3Q9HD45 589 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 GLRX2Q9NS18 164 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 RASD1Q9Y272 281 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 TMEM14AQ9Y6G1 99 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 PTPRTO14522 1441 aa0.8□□□□□ -2.28
PDGFC-208ENST00000512711 IGLV3-22A0A075B6J6 115 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 IGHV5-10-1A0A0J9YXX1 117 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms