RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ZNF551Q7Z340 670 aaPredicted RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 R3HCC1LQ7Z5L2 792 aaKnown RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 MISPQ8IVT2 679 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 SAMD14Q8IZD0 417 aaPredicted RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 CLECL1Q8IZS7 167 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 OR4F15Q8NGB8 312 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 OR8J2Q8NGG1 315 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 MRAPQ8TCY5 172 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 VPS33AQ96AX1 596 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 ELP4Q96EB1 424 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 OTUB1Q96FW1 271 aaPredicted RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 ZNF764Q96H86 408 aaPredicted RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 BBS4Q96RK4 519 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 DUSP26Q9BV47 211 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 LRMDAQ9H2I8 198 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 MIEF1Q9NQG6 463 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 GIMAP4Q9NUV9 329 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 DDX18Q9NVP1 670 aaKnown RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 NOTCH3Q9UM47 2321 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 A0A1W2PQD3 144 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
NUP54-211ENST00000512151 FBP2O00757 339 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 PLXNB1O43157 2135 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 CCDC22O60826 627 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 C6orf47O95873 294 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 IGLV1-44P01699 117 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 IGHV2-5P01817 119 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 T-ENOLP0DO92 83 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 ANPEPP15144 967 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 SELEP16581 610 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 MPGP29372 298 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 S100A3P33764 101 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 HPCAL1P37235 193 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 RPL3P39023 403 aaKnown RBP7.79□□□□□ -1.16
NUP54-211ENST00000512151 CDKN2CP42773 168 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 ALDH3B1P43353 468 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 SLC16A1P53985 500 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 CLNS1AP54105 237 aaKnown RBP7.79□□□□□ -1.16
NUP54-211ENST00000512151 MVKQ03426 396 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 MAD2L1BPQ15013 274 aaPredicted RBP7.79□□□□□ -1.16
NUP54-211ENST00000512151 TBRG1Q3YBR2 411 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 VPS26BQ4G0F5 336 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 PAGE3Q5JUK9 113 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.79□□□□□ -1.16
NUP54-211ENST00000512151 SAMD5Q5TGI4 173 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 SAXO2Q658L1 398 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 C16orf87Q6PH81 154 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 SLC2A7Q6PXP3 512 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 KLHL24Q6TFL4 600 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 RETREG3Q86VR2 466 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 JAZF1Q86VZ6 243 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 ANKRD46Q86W74 232 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 POU5F2Q8N7G0 328 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 GLB1L3Q8NCI6 653 aaPredicted RBP7.79□□□□□ -1.16
NUP54-211ENST00000512151 PHOSPHO1Q8TCT1 267 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 SPDL1Q96EA4 605 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 BOD1Q96IK1 185 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 AMDHD1Q96NU7 426 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 MRPL37Q9BZE1 423 aaKnown RBP7.79□□□□□ -1.16
NUP54-211ENST00000512151 C3orf14Q9HBI5 128 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 HHATLQ9HCP6 504 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 UBQLN4Q9NRR5 601 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 SIRT3Q9NTG7 399 aaPredicted RBP7.79□□□□□ -1.16
NUP54-211ENST00000512151 ARL8BQ9NVJ2 186 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 UPB1Q9UBR1 384 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 REV1Q9UBZ9 1251 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 NUP50Q9UKX7 468 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 COL7A1Q02388 2944 aa7.79□□□□□ -1.16
NUP54-211ENST00000512151 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 IGHV2OR16-5A0A0B4J2B6 119 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 OR6C65A6NJZ3 312 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 SULT2B1O00204 365 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 SCDO00767 359 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 PDPK1O15530 556 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 GPANK1O95872 356 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 IL6P05231 212 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 HOXB9P17482 250 aaPredicted RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 RASSF2P50749 326 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 P2RX1P51575 399 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 RAG2P55895 527 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 LOXL3P58215 753 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 POU3F1Q03052 451 aaPredicted RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 TGFBR3Q03167 851 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 KRT72Q14CN4 511 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 QPRTQ15274 297 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 TAF9Q16594 264 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 DUSP5Q16690 384 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 TIGD2Q4W5G0 525 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 C1QTNF12Q5T7M4 302 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 SNX32Q86XE0 403 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 CLEC4FQ8N1N0 589 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 DEFB108BQ8NET1 73 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 BHLHE22Q8NFJ8 381 aaPredicted RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 GTF2H4Q92759 462 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 BCL2L2Q92843 193 aaPredicted RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 SLC7A6OSQ96CW6 309 aaPredicted RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 GIMAP5Q96F15 307 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 ANKRD27Q96NW4 1050 aa7.78□□□□□ -1.16
NUP54-211ENST00000512151 RAB3IPQ96QF0 476 aaPredicted RBP7.78□□□□□ -1.16
NUP54-211ENST00000512151 OR52E6Q96RD3 313 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms