RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CLDN8P56748 225 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 CKAP4Q07065 602 aaKnown RBP16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 TEX29Q8N6K0 151 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 ANKK1Q8NFD2 765 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 IL17RDQ8NFM7 739 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 NEURL3Q96EH8 262 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 MECRQ9BV79 373 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 PTDSS2Q9BVG9 487 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 ZNF416Q9BWM5 594 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 TAPBPLQ9BX59 468 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 TXLNGYQ9BZA5 131 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 ARMCX1Q9P291 453 aa16.23■□□□□ 0.19
HMGCS1-206ENST00000511774 DNAJC9-AS1A6NH13 148 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 A8MVM7 634 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 CPSF4O95639 269 aaKnown RBP16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 IGHV2-5P01817 119 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 NUDT17P0C025 328 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 PRG2P13727 222 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 UQCRC2P22695 453 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 CCT5P48643 541 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 PIGFQ07326 219 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 MAPK11Q15759 364 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 DCAF12L2Q5VW00 463 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 TRMT10CQ7L0Y3 403 aaKnown RBP16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 TMEM123Q8N131 208 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 TSPAN32Q96QS1 320 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 RCE1Q9Y256 329 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 CACNG2Q9Y698 323 aa16.22■□□□□ 0.19
HMGCS1-206ENST00000511774 ZNF99A8MXY4 864 aaPredicted RBP16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 J3QLI3 93 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 SLC43A1O75387 559 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 SHBGP04278 402 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 TFPTP0C1Z6 253 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 PRTN3P24158 256 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 EGR4Q05215 589 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 CHI3L2Q15782 390 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 GSTA3Q16772 222 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 HIST2H2BDQ6DRA6 164 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 BCL6BQ8N143 479 aaPredicted RBP16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 C4orf33Q8N1A6 199 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 CADM2Q8N3J6 435 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 OR8J2Q8NGG1 315 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 GTF3AQ92664 365 aaKnown RBP16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 ZNF48Q96MX3 618 aaPredicted RBP16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 OR2M2Q96R28 347 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 C7orf69Q9H7B7 122 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 DUSP13Q9UII6 198 aa16.21■□□□□ 0.19
HMGCS1-206ENST00000511774 COPEO14579 308 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 NPHS1O60500 1241 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 CLPTM1O96005 669 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 CD79AP11912 226 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 ANPEPP15144 967 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 AQP5P55064 265 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 CCL8P80075 99 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 HPCAP84074 193 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 SRSF4Q08170 494 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 HNRNPA0Q13151 305 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF771Q7L3S4 317 aaPredicted RBP16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 DOK3Q7L591 496 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 RNF130Q86XS8 419 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 VRK2Q86Y07 508 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 GPR137CQ8N3F9 429 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 SLC25A36Q96CQ1 311 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 TRNT1Q96Q11 434 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF385DQ9H6B1 395 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 NTN4Q9HB63 628 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 MARCOQ9UEW3 520 aaPredicted RBP16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 CHST2Q9Y4C5 530 aa16.2■□□□□ 0.18
HMGCS1-206ENST00000511774 CDHR4A6H8M9 788 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 M0R3G1 203 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 GSG1Q2KHT4 349 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 REP15Q6BDI9 236 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF836Q6ZNA1 936 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 LRRC74BQ6ZQY2 392 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 FGFBP3Q8TAT2 258 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 TUBGCP3Q96CW5 907 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 KTI12Q96EK9 354 aaPredicted RBP16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 SLC35A5Q9BS91 424 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF69Q9UC07 566 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 WIPI2Q9Y4P8 454 aa16.19■□□□□ 0.18
HMGCS1-206ENST00000511774 KMT2CQ8NEZ4 4911 aaKnown RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 PRSS51A0A1B0GVH4 220 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 TRAF3IP2O43734 574 aaPredicted RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF500O60304 480 aaPredicted RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 FZD7O75084 574 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 IL7RP16871 459 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF43P17038 809 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 KRT4P19013 534 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 FPR2P25090 351 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 RPS5P46782 204 aaKnown RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 EMX2Q04743 252 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 CASP8Q14790 479 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 TRMT5Q32P41 509 aaKnown RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 KLF17Q5JT82 389 aaPredicted RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 COX20Q5RI15 118 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 ATG16L1Q676U5 607 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 WBP2NLQ6ICG8 309 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF584Q8IVC4 421 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms