RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZNF417Q8TAU3 575 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 UBASH3BQ8TF42 649 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 OR52B2Q96RD2 323 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 ZNF587Q96SQ5 575 aaPredicted RBP13.71□□□□□ -0.21
RAB40C-202ENST00000509637 EMC6Q9BV81 110 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 PAIP1Q9H074 479 aaKnown RBP13.71□□□□□ -0.21
RAB40C-202ENST00000509637 RAB1BQ9H0U4 201 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 CRLF2Q9HC73 371 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 P2RX2Q9UBL9 471 aa13.71□□□□□ -0.21
RAB40C-202ENST00000509637 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 LRRN3E7EW58 273 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 HAX1O00165 279 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 SNNO75324 88 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 AHSA1O95433 338 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 KRT75O95678 551 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 HPXP02790 462 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 KITP10721 976 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF35P13682 527 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 TCN1P20061 433 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 GRPRP30550 384 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 TXNL4AP83876 142 aaKnown RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 GNA13Q14344 377 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 SQLEQ14534 574 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 C6orf89Q6UWU4 347 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 C1orf229Q6ZS94 237 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 LINC01356Q8N9X3 169 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 NEU4Q8WWR8 484 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 YIPF5Q969M3 257 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 MAELQ96JY0 434 aaKnown RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF317Q96PQ6 595 aaPredicted RBP13.7□□□□□ -0.22
RAB40C-202ENST00000509637 KCNS3Q9BQ31 491 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 RACGAP1Q9H0H5 632 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 SLAMF8Q9P0V8 285 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 RCE1Q9Y256 329 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 PCDHB14Q9Y5E9 798 aa13.7□□□□□ -0.22
RAB40C-202ENST00000509637 A0A0G2JPF8 293 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 A0A1B0GWA3 101 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 HNRNPCL2B2RXH8 293 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 HNRNPCL3B7ZW38 293 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 TM9SF1O15321 606 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 RGS16O15492 202 aaPredicted RBP13.69□□□□□ -0.22
RAB40C-202ENST00000509637 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
RAB40C-202ENST00000509637 HNRNPCL4P0DMR1 293 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 UQCRBP14927 111 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF14P17017 642 aaPredicted RBP13.69□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF43P17038 809 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 NCF2P19878 526 aaPredicted RBP13.69□□□□□ -0.22
RAB40C-202ENST00000509637 NR4A1P22736 598 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 CHN2P52757 468 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 CRISP3P54108 245 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 SNTB2Q13425 540 aaKnown RBP13.69□□□□□ -0.22
RAB40C-202ENST00000509637 RGNQ15493 299 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 PDCD4Q53EL6 469 aaKnown RBP13.69□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF311Q5JNZ3 666 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 CARD17Q5XLA6 110 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 MEX3DQ86XN8 651 aaKnown RBP13.69□□□□□ -0.22
RAB40C-202ENST00000509637 C20orf196Q8IYI0 205 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 RFLNBQ8N5W9 214 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 SEMA6DQ8NFY4 1073 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 CLDND2Q8NHS1 167 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 GTF2H4Q92759 462 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 HPS1Q92902 700 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 BCL2L10Q9HD36 194 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 KCNK9Q9NPC2 374 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 SLC25A37Q9NYZ2 338 aa13.69□□□□□ -0.22
RAB40C-202ENST00000509637 TENM1Q9UKZ4 2725 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 LOC102725191A0A1B0GVB3 256 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 M0R3G1 203 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 HDAC3O15379 428 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 WIPF1O43516 503 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 SLC43A1O75387 559 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 SLC22A3O75751 556 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 NCR1O76036 304 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 AVPP01185 164 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 BGLAPP02818 100 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 PATE4P0C8F1 98 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 BMP2P12643 396 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 IFNGR1P15260 489 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 ANXA11P50995 505 aaKnown RBP13.68□□□□□ -0.22
RAB40C-202ENST00000509637 SH3BGRP55822 239 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-202ENST00000509637 COPZ1P61923 177 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 PIGFQ07326 219 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 DAG1Q14118 895 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 MAD2L1BPQ15013 274 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-202ENST00000509637 LARS2Q15031 903 aaKnown RBP13.68□□□□□ -0.22
RAB40C-202ENST00000509637 LIPNQ5VXI9 398 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 WDR93Q6P2C0 686 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 SLC2A7Q6PXP3 512 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 DEF8Q6ZN54 512 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 RINLQ6ZS11 566 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF540Q8NDQ6 660 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 ANKK1Q8NFD2 765 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 MRPL24Q96A35 216 aaKnown RBP13.68□□□□□ -0.22
RAB40C-202ENST00000509637 SLC41A3Q96GZ6 507 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 MOGAT1Q96PD6 335 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 PLA2G12AQ9BZM1 189 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 SDR39U1Q9NRG7 319 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-202ENST00000509637 MED29Q9NX70 200 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms