RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 KCNJ3P48549 501 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 MRPL19P49406 292 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 KCNJ2P63252 427 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 ARL16Q0P5N6 197 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 CHI3L2Q15782 390 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 VAMP3Q15836 100 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 MUC21Q5SSG8 566 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 MEDAGQ5VYS4 303 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 TWF2Q6IBS0 349 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 KCNIP4Q6PIL6 250 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 SPSB3Q6PJ21 355 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 C19orf48Q6RUI8 117 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 LCLAT1Q6UWP7 414 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 COPS6Q7L5N1 327 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 NUFIP2Q7Z417 695 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 HDDC2Q7Z4H3 204 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 DHDDSQ86SQ9 333 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 CARM1Q86X55 608 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 LACC1Q8IV20 430 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 SLC35F2Q8IXU6 374 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 FAM9CQ8IZT9 166 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 TCAIMQ8N3R3 496 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF781Q8N8C0 355 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 C8orf31Q8N9H6 132 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 UBA3Q8TBC4 463 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 MRGPRDQ8TDS7 321 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 OPTNQ96CV9 577 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 FAM218AQ96MZ4 157 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 DOCK7Q96N67 2140 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 OR5B2Q96R09 309 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 CLCC1Q96S66 551 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 PLEKHF1Q96S99 279 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 CYTH2Q99418 400 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 CNN2Q99439 309 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 DPH7Q9BTV6 452 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 TRIM62Q9BVG3 475 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 NAT10Q9H0A0 1025 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 ADNPQ9H2P0 1102 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 ELOVL6Q9H5J4 265 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 MOB1AQ9H8S9 216 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 PLEKHA3Q9HB20 300 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 NMRAL1Q9HBL8 299 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 TMEM165Q9HC07 324 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 RAB18Q9NP72 206 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF71Q9NQZ8 489 aaPredicted RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 SLC17A5Q9NRA2 495 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 UXTQ9UBK9 157 aaPredicted RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 VANGL2Q9ULK5 521 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 TMCO1Q9UM00 188 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 FAF1Q9UNN5 650 aaPredicted RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 EXOGQ9Y2C4 368 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 AK6Q9Y3D8 172 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 BZW2Q9Y6E2 419 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 V9GYY5 206 aaPredicted RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 TRIP12Q14669 1992 aaPredicted RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 MAPK8IP3Q9UPT6 1336 aa1.87□□□□□ -2.11
PDE4D-218ENST00000509368 KIAA0100Q14667 2235 aaKnown RBP1.87□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 CCL15-CCL14A0A0B4J2E2 113 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 PLSCR5A0PG75 271 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 BTBD17A6NE02 478 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 IQCF5A8MTL0 148 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 DYNC1I1O14576 645 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 CXCL13O43927 109 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 SRPX2O60687 465 aaPredicted RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 SMIM24O75264 130 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 DUSP11O75319 330 aaKnown RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 RPP14O95059 124 aaKnown RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 TGM6O95932 706 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 CSTAP01040 98 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 NGFP01138 241 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ATP1A1P05023 1023 aaKnown RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 F7P08709 466 aaPredicted RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ALOX5P09917 674 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF43P17038 809 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 HOXB8P17481 243 aaPredicted RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 IL12AP29459 219 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 HMOX2P30519 316 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ETV5P41161 510 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 MAGEA5P43359 124 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ATP4BP51164 291 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ATP1B3P54709 279 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 YWHAEP62258 255 aaKnown RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 SRPXP78539 464 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 DHODHQ02127 395 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 TLE4Q04727 773 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ZFP36L1Q07352 338 aaKnown RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ZNF177Q13360 481 aaPredicted RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 GK3PQ14409 553 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 CASP8Q14790 479 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 TSC22D1Q15714 1073 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 ZIC1Q15915 447 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 CCL15Q16663 113 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 GTDC1Q4AE62 458 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 UNC50Q53HI1 259 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 TTMPQ5BVD1 217 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 WSCD1Q658N2 575 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 THOC7Q6I9Y2 204 aaKnown RBP1.86□□□□□ -2.11
PDE4D-218ENST00000509368 NADSYN1Q6IA69 706 aa1.86□□□□□ -2.11
PDE4D-218ENST00000509368 KIAA1161Q6NSJ0 714 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms