RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TPBGQ13641 420 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 DDX39BQ13838 428 aaKnown RBP4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 GPR176Q14439 515 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 GSG1Q2KHT4 349 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 SYTL3Q4VX76 610 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 UNC50Q53HI1 259 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 PAGE3Q5JUK9 113 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 C6orf136Q5SQH8 315 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 KCTD11Q693B1 232 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 HBMQ6B0K9 141 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 OR5M10Q6IEU7 315 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 NCEH1Q6PIU2 408 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 CD200R1LQ6Q8B3 271 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 SUSD1Q6UWL2 747 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 ENPP6Q6UWR7 440 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 CASP12Q6UXS9 341 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 QSOX2Q6ZRP7 698 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 MOB3CQ70IA8 216 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 TMUB2Q71RG4 321 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 HIST3H2AQ7L7L0 130 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM200AQ86VY9 491 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 CALHM3Q86XJ0 350 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 ANGPTL5Q86XS5 388 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 MFSD6LQ8IWD5 586 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 KLHDC8BQ8IXV7 354 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 CRYBG2Q8N1P7 616 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 FBXO39Q8N4B4 442 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 WDTC1Q8N5D0 677 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 NKAPQ8N5F7 415 aaKnown RBP4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 RASGEF1AQ8N9B8 481 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 AVL9Q8NBF6 648 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 B3GNT7Q8NFL0 401 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 OR8J1Q8NGP2 316 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 OR1J4Q8NGS1 313 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 OR10K1Q8NGX5 313 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 TERB2Q8NHR7 220 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM110BQ8TC76 370 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC7A13Q8TCU3 470 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 WFIKKN2Q8TEU8 576 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 LCN9Q8WX39 176 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 MRPS31Q92665 395 aaKnown RBP4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 TFGQ92734 400 aaPredicted RBP4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 HIST1H2ACQ93077 130 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC22A18Q96BI1 424 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 C3orf49Q96BT1 292 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 MALSU1Q96EH3 234 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 SMARCD1Q96GM5 515 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 C12orf66Q96MD2 445 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 PPM1MQ96MI6 270 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 WFIKKN1Q96NZ8 548 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 OR2A7Q96R45 310 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF382Q96SR6 550 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 PCYT2Q99447 389 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 MXRA8Q9BRK3 442 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 MSTO1Q9BUK6 570 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 KATNB1Q9BVA0 655 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 TMED9Q9BVK6 235 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 CACNG6Q9BXT2 260 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 BARHL1Q9BZE3 327 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 CPVLQ9H3G5 476 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 LRRN3Q9H3W5 708 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 HHATLQ9HCP6 504 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 CYSLTR2Q9NS75 346 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 MS4A12Q9NXJ0 267 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 GPR83Q9NYM4 423 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 RASL12Q9NYN1 266 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 UXTQ9UBK9 157 aaPredicted RBP4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF69Q9UC07 566 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 PLEKHB1Q9UF11 243 aaPredicted RBP4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 FBXL4Q9UKA2 621 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 FBXO4Q9UKT5 387 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 FBXL3Q9UKT7 428 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 FZD10Q9ULW2 581 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 GREB1LQ9C091 1923 aaPredicted RBP4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 DNAH14Q0VDD8 3507 aa4.15□□□□□ -1.75
PDLIM5-211ENST00000508531 SMCHD1A6NHR9 2005 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 NCOR2Q9Y618 2525 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A087WYN8 130 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 LOC105369274A0A096LPK9 316 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 TRAV19A0A0A6YYK7 116 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A0U1RQF3 1178 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 GNG14A0A1W2PPG7 69 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 BTBD17A6NE02 478 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM74A7A6NL05 159 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 ANXA2P2A6NMY6 339 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 KDM4EB2RXH2 506 aaPredicted RBP4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 TRDCB7Z8K6 153 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 WASH3PC4AMC7 463 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 MKRN2OSH3BPM6 223 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 SMLR1H3BR10 107 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 J3KR12 359 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 M0QYV0 167 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 M0R296 226 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 TNFRSF11BO00300 401 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 MID1O15344 667 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 SEPT4O43236 478 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 GSTZ1O43708 216 aaPredicted RBP4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 CACNG3O60359 315 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 RPP14O95059 124 aaKnown RBP4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF682O95780 498 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms