RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 C3orf36Q3SXR2 165 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 ANKRD16Q6P6B7 361 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 MYPOPQ86VE0 399 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 TMEM123Q8N131 208 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 ADPRHL1Q8NDY3 354 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 ANKK1Q8NFD2 765 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 DNAJA4Q8WW22 397 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 SLC38A4Q969I6 547 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 ZNF837Q96EG3 531 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 WFDC6Q9BQY6 131 aa11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 CPPED1Q9BRF8 314 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 TESQ9UGI8 421 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-205ENST00000508319 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 A0A1B0GX12 115 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 ZNF503-AS2A6NEH8 195 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 TPST2O60704 377 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 PDE5AO76074 875 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 HPRP00739 348 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 CRYAAP02489 173 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 CELA3BP08861 270 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 GPX2P18283 190 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 AQP1P29972 269 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 RGS8P57771 180 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 NCALDP61601 193 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 SNRPD2P62316 118 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 ARF1P84077 181 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 SQLEQ14534 574 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 ADIPOQQ15848 244 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 AGKQ53H12 422 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 TTMPQ5BVD1 217 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 FAM91A1Q658Y4 838 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 ULK3Q6PHR2 472 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 DLEU7Q6UYE1 221 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 H1FNTQ75WM6 255 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 KRT73Q86Y46 540 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 PROX1Q92786 737 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 SLC41A3Q96GZ6 507 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 ATP6V1G3Q96LB4 118 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 OR2M2Q96R28 347 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 SPATA5L1Q9BVQ7 753 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 GPR35Q9HC97 309 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 MOV10Q9HCE1 1003 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 CORO2BQ9UQ03 480 aa11.3□□□□□ -0.6
HMGCS1-205ENST00000508319 A0A087WUJ7 227 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 PRORSD1PA6NEY8 169 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 VWC2LB2RUY7 222 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 AKAP8O43823 692 aaKnown RBP11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 BGLAPP02818 100 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 OR4A8P0C604 315 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 ZNF16P17020 682 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 CBLP22681 906 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 SLC6A2P23975 617 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 SERPINF1P36955 418 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 C1DQ13901 141 aaKnown RBP11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 EFNB3Q15768 340 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 CEACAM16Q2WEN9 425 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 CHRFAM7AQ494W8 412 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 PHYHD1Q5SRE7 291 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 NET1Q7Z628 596 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 PTOV1Q86YD1 416 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 GPR137CQ8N3F9 429 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 PIK3C3Q8NEB9 887 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 NUP37Q8NFH4 326 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 SPATA3Q8NHX4 192 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 SLC47A1Q96FL8 570 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 CRLF2Q9HC73 371 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 FKBP7Q9Y680 259 aa11.29□□□□□ -0.6
HMGCS1-205ENST00000508319 ZNF99A8MXY4 864 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 B9A039 149 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 MS4A18H0YCH9 400 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 SEC14L2O76054 403 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 MFN2O95140 757 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 IGHV4-31P0DP07 118 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 HLA-DOBP13765 273 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 CBR1P16152 277 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 USF1P22415 310 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 PPOXP50336 477 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 IDH3GP51553 393 aaPredicted RBP11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 CDH12P55289 794 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 PCBP3P57721 371 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 HGFACQ04756 655 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 OR1Q1Q15612 314 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 MS4A18Q3C1V0 323 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 SLC46A3Q7Z3Q1 461 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 DHDDSQ86SQ9 333 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 ARMC8Q8IUR7 673 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 WDFY1Q8IWB7 410 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 UEVLDQ8IX04 471 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 ANKS4BQ8N8V4 417 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 SCAIQ8N9R8 606 aa11.28□□□□□ -0.6
HMGCS1-205ENST00000508319 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms