RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF304Q9HCX3 659 aa13.19□□□□□ -0.3
DDX41-208ENST00000507955 INPP5EQ9NRR6 644 aa13.19□□□□□ -0.3
DDX41-208ENST00000507955 NCDNQ9UBB6 729 aa13.19□□□□□ -0.3
DDX41-208ENST00000507955 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
DDX41-208ENST00000507955 ACOD1A6NK06 481 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ODF4Q2M2E3 257 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ALG10Q5BKT4 473 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 LINC01590Q5TEZ4 76 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ARHGAP40Q5TG30 622 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 PTCRAQ6ISU1 281 aaPredicted RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 PXKQ7Z7A4 578 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 PLCZ1Q86YW0 608 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 SLC38A9Q8NBW4 561 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 FAM174AQ8TBP5 190 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 TRMT10AQ8TBZ6 339 aaKnown RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 ADAMTS18Q8TE60 1221 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 SLC25A36Q96CQ1 311 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 THAP7Q9BT49 309 aaPredicted RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 ALG12Q9BV10 488 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 SLC25A18Q9H1K4 315 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 HSPB11Q9Y547 144 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 PI4KAP42356 2102 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 TMEM72A0PK05 275 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 TNFRSF10AO00220 468 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 BCAT2O15382 392 aaPredicted RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ATF1P18846 271 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 GALP22466 123 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 NRG3P56975 720 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 RPL18Q07020 188 aaKnown RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 CDK5R1Q15078 307 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 BCL2L15Q5TBC7 163 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 KANSL1Q7Z3B3 1105 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 IZUMO1Q8IYV9 350 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 CREB3L1Q96BA8 519 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ZNF578Q96N58 590 aaPredicted RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 SLC46A1Q96NT5 459 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 NPAS1Q99742 590 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 GTPBP2Q9BX10 602 aaKnown RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 TSPAN10Q9H1Z9 355 aaPredicted RBP13.18□□□□□ -0.3
DDX41-208ENST00000507955 FGF21Q9NSA1 209 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ING3Q9NXR8 418 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 EPHA6Q9UF33 1036 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 ADAM30Q9UKF2 790 aa13.18□□□□□ -0.3
DDX41-208ENST00000507955 MED12Q93074 2177 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 CACNA1EQ15878 2313 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 BLACEA4D250 179 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 EEF1E1O43324 174 aaKnown RBP13.17□□□□□ -0.3
DDX41-208ENST00000507955 FBLP22087 321 aaKnown RBP13.17□□□□□ -0.3
DDX41-208ENST00000507955 ACTC1P68032 377 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 ACTA1P68133 377 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 FCN2Q15485 313 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 FAM205BPQ63HN1 556 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 LRRC28Q86X40 367 aaPredicted RBP13.17□□□□□ -0.3
DDX41-208ENST00000507955 OR14A16Q8NHC5 309 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 ACOT12Q8WYK0 555 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 AKAP1Q92667 903 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX41-208ENST00000507955 ABCG5Q9H222 651 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 CDC40O60508 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX41-208ENST00000507955 PPM1BO75688 479 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 GUSBP08236 651 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 OR8G3PP0DMU2 310 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 RAB3BP20337 219 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 IL12BP29460 328 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 MAB21L1Q13394 359 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 FAM122BQ7Z309 247 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 C17orf50Q8WW18 174 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 RFT1Q96AA3 541 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 SMIM19Q96E16 107 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 DERL3Q96Q80 235 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 NMNAT2Q9BZQ4 307 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 SLC23A1Q9UHI7 598 aa13.17□□□□□ -0.3
DDX41-208ENST00000507955 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
DDX41-208ENST00000507955 TRAV6A0A075B6T7 132 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 TCRBV16S1A1N1A0A5B0 115 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 ZNF354AO60765 605 aaPredicted RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 TIAF1O95411 115 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 ADRB1P08588 477 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 ASAH2BP0C7U1 165 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 GBX2P52951 348 aaPredicted RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 CLDN12P56749 244 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 POU4F2Q12837 409 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 CDONQ4KMG0 1287 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 MESTQ5EB52 335 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 CEP78Q5JTW2 689 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 JAZF1Q86VZ6 243 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 GCDHQ92947 438 aaPredicted RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 TSPAN32Q96QS1 320 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 WDR76Q9H967 626 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 SLC22A11Q9NSA0 550 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 FRG2CA6NGY1 282 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms