RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MYOZ1Q9NP98 299 aaPredicted RBP10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC25A37Q9NYZ2 338 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 KCNS2Q9ULS6 477 aa10.02□□□□□ -0.81
HMGCS1-204ENST00000507293 TRAV36DV7A0A075B6V5 113 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 LOC390937A0A1W2PQ73 354 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC35F4A4IF30 521 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF503-AS2A6NEH8 195 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 RPL36A-HNRNPH2H7BZ11 118 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 TRAF3IP2O43734 574 aaPredicted RBP10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 AKAP8O43823 692 aaKnown RBP10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 OR2T1O43869 369 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 SEC14L2O76054 403 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 IGKV3-15P01624 115 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 ARAFP10398 606 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 ETS2P15036 469 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 CBR1P16152 277 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 GRPRP30550 384 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 THBS4P35443 961 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 PPOXP50336 477 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 HGFACQ04756 655 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 NPRL3Q12980 569 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 CEACAM16Q2WEN9 425 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 GLIPR1L2Q4G1C9 344 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 IQCCQ4KMZ1 466 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 ALG10BQ5I7T1 473 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 LRIF1Q5T3J3 769 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 FAM69AQ5T7M9 428 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 FAM166AQ6J272 317 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 DHRS4L2Q6PKH6 230 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 EPGNQ6UW88 154 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 C5orf46Q6UWT4 87 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 MSRB3Q8IXL7 192 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 C10orf111Q8N326 155 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 FAM169BQ8N8A8 192 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 NUP37Q8NFH4 326 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 OR4F15Q8NGB8 312 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 MSI2Q96DH6 328 aaKnown RBP10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF837Q96EG3 531 aaPredicted RBP10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 OR2M2Q96R28 347 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 BPESC1Q9GZL8 116 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF442Q9H7R0 627 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 TMBIM4Q9HC24 238 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 CRLF2Q9HC73 371 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 KLHL14Q9P2G3 628 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 MXRA5Q9NR99 2828 aa10.01□□□□□ -0.81
HMGCS1-204ENST00000507293 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10□□□□□ -0.812e-15■■□□□ 12.3
HMGCS1-204ENST00000507293 LOC100289279A0A1B0GTE1 492 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 hCG_2039718K7EN88 272 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 M0R3G1 203 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 POLR3GO15318 223 aaPredicted RBP10□□□□□ -0.81
HMGCS1-204ENST00000507293 TPST1O60507 370 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 NQO1P15559 274 aaKnown RBP10□□□□□ -0.81
HMGCS1-204ENST00000507293 MRPL19P49406 292 aaKnown RBP10□□□□□ -0.81
HMGCS1-204ENST00000507293 NCALDP61601 193 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 CDK6Q00534 326 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 KRTAP24-1Q3LI83 254 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 PHYHD1Q5SRE7 291 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 CARD17Q5XLA6 110 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 H1FNTQ75WM6 255 aaPredicted RBP10□□□□□ -0.81
HMGCS1-204ENST00000507293 SPATA21Q7Z572 469 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 MDP1Q86V88 176 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 KRT73Q86Y46 540 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 FUNDC1Q8IVP5 155 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 UEVLDQ8IX04 471 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 TMEM123Q8N131 208 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 SVOPLQ8N434 492 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 LSMEM1Q8N8F7 131 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 PIK3C3Q8NEB9 887 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 RNF217Q8TC41 542 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 DNAJA4Q8WW22 397 aaPredicted RBP10□□□□□ -0.81
HMGCS1-204ENST00000507293 SPDL1Q96EA4 605 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 RAB1BQ9H0U4 201 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 TCF7L2Q9NQB0 619 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 SLAMF8Q9P0V8 285 aa10□□□□□ -0.81
HMGCS1-204ENST00000507293 TESQ9UGI8 421 aaKnown RBP10□□□□□ -0.81
HMGCS1-204ENST00000507293 IGHV2OR16-5A0A0B4J2B6 119 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 LOC102725191A0A1B0GVB3 256 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF99A8MXY4 864 aaPredicted RBP9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 MS4A18H0YCH9 400 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 STAMBPO95630 424 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 HPRP00739 348 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 HLA-DOBP13765 273 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF23P17027 643 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 SRD5A1P18405 259 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 NPR2P20594 1047 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 PPIBP23284 216 aaKnown RBP9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 ARR3P36575 388 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 CAPZA2P47755 286 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 IDH3AP50213 366 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 RGS8P57771 180 aaPredicted RBP9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 SNTB2Q13425 540 aaKnown RBP9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 SCARB2Q14108 478 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 MS4A18Q3C1V0 323 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 PAGE3Q5JUK9 113 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 FAM120AOSQ5T036 256 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 FAM91A1Q658Y4 838 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 REEP3Q6NUK4 255 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 ULK3Q6PHR2 472 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms