RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PRAMEF6Q5VXH4 476 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 STXBP4Q6ZWJ1 553 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SERINC5Q86VE9 423 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC47A2Q86VL8 602 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 FAM228AQ86W67 206 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 C9orf40Q8IXQ3 194 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 BBS5Q8N3I7 341 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 FGFRL1Q8N441 504 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 ATP6V0D2Q8N8Y2 350 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 FAM83FQ8NEG4 500 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR4D9Q8NGE8 314 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR52K2Q8NGK3 314 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 PPTC7Q8NI37 304 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 NR4A3Q92570 626 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 MRPS31Q92665 395 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 ESR2Q92731 530 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC38A2Q96QD8 506 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR5M11Q96RB7 305 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 TGS1Q96RS0 853 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CYP2S1Q96SQ9 504 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SOSTQ9BQB4 213 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CHRDL1Q9BU40 450 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 GPR61Q9BZJ8 451 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 ROPN1BQ9BZX4 212 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 NAT10Q9H0A0 1025 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 CHMP4BQ9H444 224 aaKnown RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 NUDT15Q9NV35 164 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 PAK1IP1Q9NWT1 392 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 SPATA7Q9P0W8 599 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 ONECUT1Q9UBC0 465 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 RABL2AQ9UBK7 228 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 MYH8P13535 1937 aa2.52□□□□□ -2.01
TRAPPC11-205ENST00000506426 COL4A6Q14031 1691 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 ADGRA3Q8IWK6 1321 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 SULT2B1O00204 365 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 HAS3O00219 553 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF253O75346 499 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 DIRAS1O95057 198 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 PLEKHA8P1O95397 391 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CLDN9O95484 217 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 GNA14O95837 355 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 IGHG4P01861 327 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 PGAM2P15259 253 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 GCFC2P16383 781 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 IGHV1-2P23083 117 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 MT3P25713 68 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 GNA11P29992 359 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 NMT1P30419 496 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CD52P31358 61 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 FGF9P31371 208 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCR1P32246 355 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 UGT1A5P35504 534 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 RPL29P47914 159 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 DAP3P51398 398 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 DUSP3P51452 185 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 HNRNPA3P51991 378 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 IST1P53990 364 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 ATP1B3P54709 279 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 LIM2P55344 173 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 ERVPABLB-1P60509 514 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 MRPS11P82912 194 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 OGDHQ02218 1023 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 OC90Q02509 493 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 PAX2Q02962 417 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 KLRB1Q12918 225 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 MRPL28Q13084 256 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 SERTAD2Q14140 314 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 ALX1Q15699 326 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 MRGPRG-AS1Q2M3A8 158 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 TRIM16LQ309B1 348 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 GLYR1Q49A26 553 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC22A6Q4U2R8 563 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 C14orf177Q52M58 125 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 C6orf226Q5I0X4 101 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 METTL11BQ5VVY1 283 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 LIPNQ5VXI9 398 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 OLFML2AQ68BL7 652 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR2A2Q6IF42 318 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 FAM199XQ6PEV8 388 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCDC137Q6PK04 289 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 METAP1DQ6UB28 335 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CDR2LQ86X02 465 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCDC65Q8IXS2 484 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR1L4Q8NGR5 311 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCDC26Q8TAB7 109 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 PHOSPHO2Q8TCD6 241 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 UBE2E3Q969T4 207 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 PSMG2Q969U7 264 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 FAF2Q96CS3 445 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CELF6Q96J87 481 aaKnown RBP2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 MS4A14Q96JA4 679 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 CLCC1Q96S66 551 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 POPDC2Q9HBU9 364 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC2A8Q9NY64 477 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF581Q9P0T4 197 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 SPRR3Q9UBC9 169 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF639Q9UID6 485 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 PHF11Q9UIL8 331 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 RIMS3Q9UJD0 308 aa2.51□□□□□ -2.01
TRAPPC11-205ENST00000506426 KLK13Q9UKR3 277 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms