RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ARPC4-TTLL3A0A0A6YYG9 625 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 ZNF503-AS2A6NEH8 195 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 PRORSD1PA6NEY8 169 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 ELOA3DA6NLF2 546 aaPredicted RBP12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 EVPLLA8MZ36 301 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 M0R1B8 84 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 SMAD7O15105 426 aaKnown RBP12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 GRPRP30550 384 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 ACVR1BP36896 505 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 CDH12P55289 794 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 RBBP4Q09028 425 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 CLEC12BQ2HXU8 276 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 ELOA3BQ3SY89 546 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 TBRG1Q3YBR2 411 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 PHYHD1Q5SRE7 291 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 NIPAL3Q6P499 406 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 ULK3Q6PHR2 472 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 CALHM3Q86XJ0 350 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 SMYD1Q8NB12 490 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 ELOA3Q8NG57 546 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 MAGEE2Q8TD90 523 aaPredicted RBP12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 TAMM41Q96BW9 452 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 SLC25A36Q96CQ1 311 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 OXGR1Q96P68 337 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 MOGAT1Q96PD6 335 aa12.21□□□□□ -0.45
PDLIM7-211ENST00000504318 CHD3Q12873 2000 aaKnown RBP12.21□□□□□ -0.46
PDLIM7-211ENST00000504318 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 FAM171A2A8MVW0 826 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 LRRN3E7EW58 273 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 M0QX08 132 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 M0R3H8 397 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 AIM2O14862 343 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 OR2T1O43869 369 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 FMO6PO60774 539 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 IGLV1-44P01699 117 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 OPN1SWP03999 348 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 C8BP07358 591 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 HLA-DOBP13765 273 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 CLDN17P56750 224 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 RGS8P57771 180 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 ETFDHQ16134 617 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 SWT1Q5T5J6 900 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 KLHL17Q6TDP4 642 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 MYPOPQ86VE0 399 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 KRT73Q86Y46 540 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 RBM45Q8IUH3 476 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 ARMC8Q8IUR7 673 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 C11orf65Q8NCR3 313 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 ANKK1Q8NFD2 765 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 BHLHE22Q8NFJ8 381 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC47A1Q96FL8 570 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 OR2M2Q96R28 347 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF607Q96SK3 696 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 TMEM43Q9BTV4 400 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF426Q9BUY5 554 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 PCDHAC1Q9H158 963 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 EVA1AQ9H8M9 152 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 CACYBPQ9HB71 228 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 CBLN4Q9NTU7 201 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 ANGPT4Q9Y264 503 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
PDLIM7-211ENST00000504318 SVEP1Q4LDE5 3571 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 OR6C65A6NJZ3 312 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF587BE7ETH6 402 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 ATP6V1G2-DDX39BF2Z307 99 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 SERPINB7O75635 380 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 DNAJC8O75937 253 aaPredicted RBP12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 IGKV3-15P01624 115 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 PCGF2P35227 344 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 PRPS1P60891 318 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 TGFBR3Q03167 851 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 SWI5Q1ZZU3 235 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 C3orf36Q3SXR2 165 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 NANOGP8Q6NSW7 305 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF544Q6NX49 715 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC22A25Q6T423 547 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 H1FNTQ75WM6 255 aaPredicted RBP12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 CCDC80Q76M96 950 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 MUC15Q8N387 334 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 OR10A6Q8NH74 314 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF75AQ96N20 296 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 NANOGQ9H9S0 305 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 OBP2BQ9NPH6 170 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 RPS6KB2Q9UBS0 482 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 USP22Q9UPT9 525 aa12.19□□□□□ -0.46
PDLIM7-211ENST00000504318 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 H7C417 338 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 ANGPT2O15123 496 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC22A2O15244 555 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF43P17038 809 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 CALB2P22676 271 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 CBLP22681 906 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 CALCRP30988 508 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 ROR2Q01974 943 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms