RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 SLC22A2O15244 555 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 CHP2O43745 196 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 LYPD3O95274 346 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 THY1P04216 161 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 VIMP08670 466 aaKnown RBP11.96□□□□□ -0.49
HOXC6-203ENST00000504315 ZNF83P51522 516 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 SH3BGRP55822 239 aaPredicted RBP11.96□□□□□ -0.49
HOXC6-203ENST00000504315 CLDN17P56750 224 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 PRPS1P60891 318 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 LGALS3BPQ08380 585 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 MS4A18Q3C1V0 323 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 KRTAP21-3Q3LHN1 58 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 RABL3Q5HYI8 236 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 C11orf71Q6IPW1 123 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 NHLRC1Q6VVB1 395 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 B3GLCTQ6Y288 498 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 TSPYL5Q86VY4 417 aaPredicted RBP11.96□□□□□ -0.49
HOXC6-203ENST00000504315 TMEM123Q8N131 208 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 C10orf82Q8WW14 230 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 TRMT61AQ96FX7 289 aaKnown RBP11.96□□□□□ -0.49
HOXC6-203ENST00000504315 MOGAT1Q96PD6 335 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 MRPL39Q9NYK5 338 aaKnown RBP11.96□□□□□ -0.49
HOXC6-203ENST00000504315 CRNNQ9UBG3 495 aaPredicted RBP11.96□□□□□ -0.49
HOXC6-203ENST00000504315 TRIM64A6NGJ6 449 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 TRIM64BA6NI03 449 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 E7EQL1 145 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 AKAP8O43823 692 aaKnown RBP11.95□□□□□ -0.5
HOXC6-203ENST00000504315 WNT11O96014 354 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 HPRP00739 348 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 MT-ATP6P00846 226 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 TTKP33981 857 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 VEZF1Q14119 521 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 C3orf36Q3SXR2 165 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 TBRG1Q3YBR2 411 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 MMEL1Q495T6 779 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 ENTPD8Q5MY95 495 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 ERICH5Q6P6B1 374 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 WDR88Q6ZMY6 472 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 SNX32Q86XE0 403 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 ADAMTS16Q8TE57 1224 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 BCL2L2Q92843 193 aaPredicted RBP11.95□□□□□ -0.5
HOXC6-203ENST00000504315 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 ZNF583Q96ND8 569 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 OR2M2Q96R28 347 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 SMR3AQ99954 134 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 ASPNQ9BXN1 380 aa11.95□□□□□ -0.5
HOXC6-203ENST00000504315 TRAPPC13A5PLN9 417 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 SLC43A1O75387 559 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 KRT33AO76009 404 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 HEXAP06865 529 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
HOXC6-203ENST00000504315 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
HOXC6-203ENST00000504315 CDKN1AP38936 164 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 MDH1P40925 334 aaKnown RBP11.94□□□□□ -0.5
HOXC6-203ENST00000504315 ROR2Q01974 943 aaKnown RBP11.94□□□□□ -0.5
HOXC6-203ENST00000504315 PUDPQ08623 228 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 AGAP6Q5VW22 663 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 HMBOX1Q6NT76 420 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 ZNF544Q6NX49 715 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 ANKRD16Q6P6B7 361 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 SLC22A25Q6T423 547 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 KLHL24Q6TFL4 600 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 PXKQ7Z7A4 578 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 RBM45Q8IUH3 476 aaKnown RBP11.94□□□□□ -0.5
HOXC6-203ENST00000504315 UEVLDQ8IX04 471 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 FAM169BQ8N8A8 192 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 PCYOX1LQ8NBM8 494 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 PIK3C3Q8NEB9 887 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 GTPBP3Q969Y2 492 aaKnown RBP11.94□□□□□ -0.5
HOXC6-203ENST00000504315 LRR1Q96L50 414 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 ECSITQ9BQ95 431 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 ALG2Q9H553 416 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 GPR35Q9HC97 309 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 MOV10Q9HCE1 1003 aaKnown RBP11.94□□□□□ -0.5
HOXC6-203ENST00000504315 CBLN4Q9NTU7 201 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
HOXC6-203ENST00000504315 CPSF4LA6NMK7 179 aaKnown RBP11.93□□□□□ -0.5
HOXC6-203ENST00000504315 FAM220BPB1ANY3 271 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 LRRN3E7EW58 273 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 PLPP3O14495 311 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 ATP8B1O43520 1251 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 IGKV3-15P01624 115 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 IGLV1-44P01699 117 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 HLA-DOBP13765 273 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 CDH2P19022 906 aaPredicted RBP11.93□□□□□ -0.5
HOXC6-203ENST00000504315 CBLP22681 906 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 C1DQ13901 141 aaKnown RBP11.93□□□□□ -0.5
HOXC6-203ENST00000504315 ZNF74Q16587 644 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 CLEC9AQ6UXN8 241 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 C20orf196Q8IYI0 205 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 DEPDC4Q8N2C3 294 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 OR5J2Q8NH18 312 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 VANGL1Q8TAA9 524 aaPredicted RBP11.93□□□□□ -0.5
HOXC6-203ENST00000504315 RNF217Q8TC41 542 aa11.93□□□□□ -0.5
HOXC6-203ENST00000504315 SLC26A7Q8TE54 656 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms