RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 DIO1P49895 249 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 MEOX1P50221 254 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ST13P50502 369 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 NUDT6P53370 316 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 CDH15P55291 814 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 OR2B6P58173 313 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 RAC3P60763 192 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ERVK-25P63136 954 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 KRR1Q13601 381 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 C1DQ13901 141 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 CRMP1Q14194 572 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC10A1Q14973 349 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 PON3Q15166 354 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 BCL2A1Q16548 175 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 C1QL3Q5VWW1 255 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 NIPAL3Q6P499 406 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 PLBD1Q6P4A8 553 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 BORAQ6PGQ7 559 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 GPR141Q7Z602 305 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 CPAMD8Q8IZJ3 1885 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 FAM109AQ8N4B1 249 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ARIH2OSQ8N7S6 290 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 POMGNT2Q8NAT1 580 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC37A3Q8NCC5 494 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 LSM14AQ8ND56 463 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 NPEPL1Q8NDH3 523 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ATP6V1C2Q8NEY4 427 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 OR52E2Q8NGJ4 325 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 MOSPD2Q8NHP6 518 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 RORBQ92753 470 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 MRPL48Q96GC5 212 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 SIGLEC11Q96RL6 698 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 NPAS1Q99742 590 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 JAM3Q9BX67 310 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ENKD1Q9H0I2 346 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 FGF20Q9NP95 211 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 HINT3Q9NQE9 182 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 KLHL1Q9NR64 748 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ERVK-18Q9QC07 812 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ZNF346Q9UL40 294 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 DIMT1Q9UNQ2 313 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 ERGIC3Q9Y282 383 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 GPR52Q9Y2T5 361 aa7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 EXOSC1Q9Y3B2 195 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-202ENST00000503338 CNTRLQ7Z7A1 2325 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 MED13Q9UHV7 2174 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 TEX13CA0A0J9YWL9 993 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 AQP7P3A6NL99 342 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 CENPBD1B2RD01 187 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 NPIPA5E9PKD4 350 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 C11orf98E9PRG8 122 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 MKRN2OSH3BPM6 223 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 K7ENP7 123 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 AKAP8O43823 692 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 SLC2A10O95528 541 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 ACTL6AO96019 429 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 F10P00742 488 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 MT-ND2P03891 347 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 RFPL3SP0C7P2 107 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 ZNF43P17038 809 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 SPINK2P20155 84 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 POU3F2P20265 443 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 IL11P20809 199 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 PCMT1P22061 227 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 CRABP1P29762 137 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 SFTPDP35247 375 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 EIF2S3P41091 472 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 AGFG1P52594 562 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 MLLT10P55197 1068 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 GFRA1P56159 465 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 B3GALT5-AS1P59052 145 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 RPS3AP61247 264 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 RPS7P62081 194 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 PPIAP62937 165 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 ACTC1P68032 377 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 ACTA1P68133 377 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 HSF1Q00613 529 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 EMX1Q04741 257 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 POU4F3Q15319 338 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 INAQ16352 499 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 ACKR1Q16570 336 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 KLHL12Q53G59 568 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 ZNF362Q5T0B9 420 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 TMEM225Q6GV28 225 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 LEG1Q6P5S2 330 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 INO80CQ6PI98 192 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 DNM1P34Q6PK57 102 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 YRDCQ86U90 279 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 IGFN1Q86VF2 1251 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 EGFL6Q8IUX8 553 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 UEVLDQ8IX04 471 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 SPACA3Q8IXA5 215 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 MEIOBQ8N635 442 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 TMEM251Q8N6I4 163 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 OR2T4Q8NH00 348 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 OR4K13Q8NH42 304 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 PTP4A1Q93096 173 aa7.3□□□□□ -1.24
TOPBP1-202ENST00000503338 CPNE4Q96A23 557 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms