RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CTXN1P60606 82 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 RBPJQ06330 500 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 ACSF3Q4G176 576 aaPredicted RBP18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 DPY19L2P2Q6ZN68 376 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 ST6GALNAC3Q8NDV1 305 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 RNF128Q8TEB7 428 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 ABHD3Q8WU67 409 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZNF570Q96NI8 536 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 IFT27Q9BW83 186 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 INIPQ9NRY2 104 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZNF175Q9Y473 711 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 FIGNL2A6NMB9 653 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 WDR1O75083 606 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 PLGP00747 810 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 CDK5Q00535 292 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 GINS1Q14691 196 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC17A1Q14916 467 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 SF3B4Q15427 424 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC27A4Q6P1M0 643 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC43A2Q8N370 569 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 IQCF1Q8N6M8 205 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 GPX7Q96SL4 187 aaPredicted RBP18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 KATNB1Q9BVA0 655 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 NRIP3Q9NQ35 241 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 FAM118AQ9NWS6 357 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 CLCF1Q9UBD9 225 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 ADAM18Q9Y3Q7 739 aa18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 SMG1Q96Q15 3661 aaKnown RBP18.19■□□□□ 0.5
CDC42SE2-206ENST00000503291 CD14P08571 375 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZNF43P17038 809 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ERVK-25P63136 954 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 POU3F1Q03052 451 aaPredicted RBP18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 RASGEF1BQ0VAM2 473 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ABLIM2Q6H8Q1 611 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 DOLPP1Q86YN1 238 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ANKK1Q8NFD2 765 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 OR2T33Q8NG76 320 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 OR4Q3Q8NH05 313 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 SF3B5Q9BWJ5 86 aaKnown RBP18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 NDEL1Q9GZM8 345 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 NOX1Q9Y5S8 564 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZNF716A6NP11 495 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZAR1LA6NP61 321 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 BHLHE40O14503 412 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 PPP1R3DO95685 299 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 C1DQ13901 141 aaKnown RBP18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ACSM5Q6NUN0 579 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 NHLRC1Q6VVB1 395 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 RPTNQ6XPR3 784 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 UEVLDQ8IX04 471 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 DHRSXQ8N5I4 330 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 CALHM2Q9HA72 323 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 IER3IP1Q9Y5U9 82 aa18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 RP1L1Q8IWN7 2480 aaPredicted RBP18.18■□□□□ 0.5
CDC42SE2-206ENST00000503291 ACVR2AP27037 513 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 PTGER4P35408 488 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 POU4F3Q15319 338 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 NSUN5P2Q63ZY6 315 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 RTL6Q6ICC9 239 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 C3P1Q6ZMU1 363 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 CREB3L2Q70SY1 520 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 P4HA3Q7Z4N8 544 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 LNX2Q8N448 690 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 OR9K2Q8NGE7 335 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 ERMAPQ96PL5 475 aaPredicted RBP18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 ADI1Q9BV57 179 aa18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 POLDIP3Q9BY77 421 aaKnown RBP18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 ING1Q9UK53 422 aaPredicted RBP18.17■□□□□ 0.5
CDC42SE2-206ENST00000503291 LOC100130705A0A1B0GUX0 176 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 A0A1W2PRG6 482 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 PRB1P04280 392 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 FCGR2AP12318 317 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 IFNGR1P15260 489 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 SMSP52788 366 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 ACKR1Q16570 336 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 GTF2IRD2BQ6EKJ0 949 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 FAM122BQ7Z309 247 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 GTF2IRD2Q86UP8 949 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZNF555Q8NEP9 628 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 CYGBQ8WWM9 190 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 WNT2BQ93097 391 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZNF775Q96BV0 537 aaPredicted RBP18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 TXNDC15Q96J42 360 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 HRASLS5Q96KN8 279 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 TP63Q9H3D4 680 aaPredicted RBP18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 RNF122Q9H9V4 155 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC25A19Q9HC21 320 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 KLHL9Q9P2J3 617 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 GRHPRQ9UBQ7 328 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 TINAGQ9UJW2 476 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 ZNF346Q9UL40 294 aaKnown RBP18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 FAM215AQ9Y5M1 114 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 ALPK2Q86TB3 2170 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 CFAP46Q8IYW2 2715 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 CD8B2A6NJW9 211 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 E9PQ18 207 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC16A6O15403 523 aa18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 TRAF3IP2O43734 574 aaPredicted RBP18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 HOXD4P09016 255 aaPredicted RBP18.16■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC16A1P53985 500 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms