RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 TMEM52BQ4KMG9 183 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 CMPK2Q5EBM0 449 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 ATRAIDQ6UW56 229 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 DLEU7Q6UYE1 221 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 ADAMTSL5Q6ZMM2 481 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 RAPH1Q70E73 1250 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 PSTKQ8IV42 348 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 MCOLN2Q8IZK6 566 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 WDR36Q8NI36 951 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 JOSD2Q8TAC2 188 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 TMEM37Q8WXS4 190 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 KLF6Q99612 283 aaPredicted RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 WRAP53Q9BUR4 548 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 DHX35Q9H5Z1 703 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 PRORYQ9H606 182 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 SYNDIG1Q9H7V2 258 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 MRPL47Q9HD33 250 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 ESM1Q9NQ30 184 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 CENPMQ9NSP4 180 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 PRODH2Q9UF12 536 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 FAM153AQ9UHL3 310 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 ZNF175Q9Y473 711 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 TEX264Q9Y6I9 313 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 NYNRINQ9P2P1 1898 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 DFFAO00273 331 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 RAD51BO15315 384 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 GSTA1P08263 222 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 ABHD2P08910 425 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 HOXC4P09017 264 aaPredicted RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 GIMD1P0DJR0 217 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 GZMAP12544 262 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 ATP6V1B1P15313 513 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 HSPA9P38646 679 aaKnown RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 MDH2P40926 338 aaKnown RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 HCAR3P49019 387 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 NPY2RP49146 381 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 KLK7P49862 253 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 CCL11P51671 97 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 HNRNPFP52597 415 aaKnown RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 CLDN6P56747 220 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 SRP54P61011 504 aaKnown RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 SSTP61278 116 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 AP1S1P61966 158 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 KLHL30Q0D2K2 578 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 C1orf61Q13536 156 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 ZNF235Q14590 738 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 SLC10A1Q14973 349 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 IRF4Q15306 451 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 GSG1Q2KHT4 349 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 BOLA3Q53S33 107 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 CCDC183Q5T5S1 534 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 GUSBP11Q6P575 273 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 TAF8Q7Z7C8 310 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 PEX5LQ8IYB4 626 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 C11orf42Q8N5U0 333 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 ARL10Q8N8L6 244 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 TMEM159Q96B96 161 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 CCT8L2Q96SF2 557 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 ANP32EQ9BTT0 268 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 APOOQ9BUR5 198 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 NLNQ9BYT8 704 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 DEFB126Q9BYW3 111 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 CARD9Q9H257 536 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 TRMT6Q9UJA5 497 aaKnown RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 BZW2Q9Y6E2 419 aaKnown RBP4.21□□□□□ -1.74
NIPBL-203ENST00000503274 MAST4O15021 2626 aa4.21□□□□□ -1.74
NIPBL-203ENST00000503274 CHD5Q8TDI0 1954 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 FLNCQ14315 2725 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 TRBV2A0A0J9YWF9 115 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 TSPAN11A1L157 253 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 HAT1O14929 419 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 VEGFDO43915 354 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 TNFSF15O95150 251 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 ECDO95905 644 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-203ENST00000503274 PCCBP05166 539 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 TPM3P06753 285 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 LAMP1P11279 417 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 SFTPCP11686 197 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 MIPP30301 263 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 PCK1P35558 622 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 MEOX2P50222 304 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 CDH6P55285 790 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 CXCL6P80162 114 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 ZNF85Q03923 595 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 PIGHQ14442 188 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-203ENST00000503274 CYTH1Q15438 398 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 HADHQ16836 314 aaKnown RBP4.2□□□□□ -1.74
NIPBL-203ENST00000503274 PRSS48Q7RTY5 328 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 RANBP3LQ86VV4 465 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-203ENST00000503274 CCDC112Q8NEF3 446 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 OR56A4Q8NGH8 313 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 CELF6Q96J87 481 aaKnown RBP4.2□□□□□ -1.74
NIPBL-203ENST00000503274 C9orf85Q96MD7 179 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 PSKH2Q96QS6 385 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 BPIFA3Q9BQP9 254 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 GSDMCQ9BYG8 508 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 TSPY26PQ9H489 355 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 LRRC19Q9H756 370 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 ASCL3Q9NQ33 180 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms