RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 TSPAN2O60636 221 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 FZD7O75084 574 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 ICOSLGO75144 302 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 EIF4EP06730 217 aaKnown RBP10.9□□□□□ -0.66
NUP54-202ENST00000502850 YES1P07947 543 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 EPXP11678 715 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 ZNF117Q03924 483 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 EGR3Q06889 387 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 KCNAB1Q14722 419 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 TATDN3Q17R31 274 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 UBE2NLQ5JXB2 153 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 FAM27D1Q5T7N8 215 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 LINC01590Q5TEZ4 76 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 MAMDC2Q7Z304 686 aaPredicted RBP10.9□□□□□ -0.66
NUP54-202ENST00000502850 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 EXD3Q8N9H8 876 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 PLPP5Q8NEB5 264 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 NLGN4YQ8NFZ3 816 aaPredicted RBP10.9□□□□□ -0.66
NUP54-202ENST00000502850 OR51L1Q8NGJ5 315 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 C15orf40Q8WUR7 153 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 TRIM63Q969Q1 353 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 Q96M85 177 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 LMF1Q96S06 567 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 DPYSL5Q9BPU6 564 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 NUDT9Q9BW91 350 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 PPIL3Q9H2H8 161 aaKnown RBP10.9□□□□□ -0.66
NUP54-202ENST00000502850 ZNF768Q9H5H4 540 aaKnown RBP10.9□□□□□ -0.66
NUP54-202ENST00000502850 UCKL1Q9NWZ5 548 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 ING3Q9NXR8 418 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 POU2F3Q9UKI9 436 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 SPATA2Q9UM82 520 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 CAMK2AQ9UQM7 478 aa10.9□□□□□ -0.66
NUP54-202ENST00000502850 ZFHX2Q9C0A1 2572 aaPredicted RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 ADAMTS20P59510 1910 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 XKRYO14609 159 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 DVL2O14641 736 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 CTDSPLO15194 276 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 OIP5O43482 229 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 HYAL3O43820 417 aaPredicted RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 FAM157BP0CG42 384 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 ARRB1P49407 418 aaPredicted RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 CSNK1EP49674 416 aaKnown RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 MMP15P51511 669 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 POLR2HP52434 150 aaKnown RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 OR10A3P58181 314 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 RPL18Q07020 188 aaKnown RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 EFR3AQ14156 821 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 BCL2A1Q16548 175 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 CBLN3Q6UW01 205 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 C9orf40Q8IXQ3 194 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 RFLNBQ8N5W9 214 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 EID2Q8N6I1 236 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 ZNF321PQ8N8H1 164 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 ZNF671Q8TAW3 534 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 OMA1Q96E52 524 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 KLHL15Q96M94 604 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 LPAR4Q99677 370 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 TGIF2Q9GZN2 237 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 DUSP15Q9H1R2 295 aaPredicted RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 MARCH7Q9H992 704 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 BRD7Q9NPI1 651 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 DHCR7Q9UBM7 475 aaKnown RBP10.89□□□□□ -0.67
NUP54-202ENST00000502850 COPS3Q9UNS2 423 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 N6AMT1Q9Y5N5 214 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 CACNG2Q9Y698 323 aa10.89□□□□□ -0.67
NUP54-202ENST00000502850 OR6C70A6NIJ9 312 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 INMT-MINDY4F8WBC2 141 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 SERPINI2O75830 405 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 SP9P0CG40 484 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 PNLIPP16233 465 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 AHCYP23526 432 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 ITPKBP27987 946 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 SLC6A1P30531 599 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 CDKN2AP42771 156 aaKnown RBP10.88□□□□□ -0.67
NUP54-202ENST00000502850 P2RX1P51575 399 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 NR0B1P51843 470 aaKnown RBP10.88□□□□□ -0.67
NUP54-202ENST00000502850 RPS11P62280 158 aaKnown RBP eCLIP10.88□□□□□ -0.67
NUP54-202ENST00000502850 EGR4Q05215 589 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 ZNF684Q5T5D7 378 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 LRRN1Q6UXK5 716 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 APOOLQ6UXV4 268 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 RABEPKQ7Z6M1 372 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 OR6S1Q8NH40 331 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 SMAP2Q8WU79 429 aaPredicted RBP10.88□□□□□ -0.67
NUP54-202ENST00000502850 CAPSLQ8WWF8 208 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 CLDN23Q96B33 292 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 ADAD1Q96M93 576 aaKnown RBP10.88□□□□□ -0.67
NUP54-202ENST00000502850 MOGAT1Q96PD6 335 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 OR14A2Q96R54 314 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 IER2Q9BTL4 223 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 DPAGT1Q9H3H5 408 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 WDR76Q9H967 626 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 NLKQ9UBE8 527 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 LAMP5Q9UJQ1 280 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 FAM186AA6NE01 2351 aa10.88□□□□□ -0.67
NUP54-202ENST00000502850 RIF1Q5UIP0 2472 aaKnown RBP10.88□□□□□ -0.67
NUP54-202ENST00000502850 AIPO00170 330 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 GSTZ1O43708 216 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 TPPPO94811 219 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 NUDT14O95848 222 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms