RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	MPZL2	O60487	215 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	AKR7A3	O95154	331 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC2A10	O95528	541 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	HIST1H2AB	P04908	130 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	FAM87A	P0C7U9	286 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	OR2B6	P58173	313 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	CTXN1	P60606	82 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	RAC3	P60763	192 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	CSNK2A1	P68400	391 aa	Predicted RBP	10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC35A1	P78382	337 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	IL5RA	Q01344	420 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	PUDP	Q08623	228 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	PMS2P3	Q13401	168 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	C6orf141	Q5SZD1	244 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	KRT80	Q6KB66	452 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	HIST3H2A	Q7L7L0	130 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	IGFN1	Q86VF2	1251 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	FAM26E	Q8N5C1	309 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	TMEM99	Q8N816	258 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	OR8J1	Q8NGP2	316 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	CNIH3	Q8TBE1	160 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	TMEM163	Q8TC26	289 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	SMPDL3B	Q92485	455 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	HIST1H2AC	Q93077	130 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	ABTB1	Q969K4	478 aa	Predicted RBP	10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF566	Q969W8	418 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	PNPLA2	Q96AD5	504 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	KATNB1	Q9BVA0	655 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	IFT27	Q9BW83	186 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	PRRG3	Q9BZD7	231 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	DEFB127	Q9H1M4	99 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	FN3K	Q9H479	309 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	INIP	Q9NRY2	104 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	AASS	Q9UDR5	926 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	ADAM18	Q9Y3Q7	739 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	IER3IP1	Q9Y5U9	82 aa		10.87	□□□□□ -0.67
MATR3-231	ENST00000502394	AQP7	O14520	342 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	EIF1AY	O14602	144 aa	Known RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	EIF1B	O60739	113 aa	Known RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	RAMP1	O60894	148 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	F13B	P05160	661 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ADORA3	P0DMS8	318 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	CPN1	P15169	458 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	CHN2	P52757	468 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	CXCR4	P61073	352 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ERVK-25	P63136	954 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	POU4F3	Q15319	338 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	SNAPC1	Q16533	368 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	OCLN	Q16625	522 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	NADK2	Q4G0N4	442 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	EMC4	Q5J8M3	183 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	LCE2C	Q5TA81	110 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	AADACL4	Q5VUY2	407 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	HBM	Q6B0K9	141 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	GPR139	Q6DWJ6	353 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ABLIM2	Q6H8Q1	611 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ARHGAP11A	Q6P4F7	1023 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	CASP12	Q6UXS9	341 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	TCEANC	Q8N8B7	351 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	EXD3	Q8N9H8	876 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	OR10D3	Q8NH80	312 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF519	Q8TB69	540 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	HDAC2	Q92769	488 aa	Known RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	WDYHV1	Q96HA8	205 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394		Q96M85	177 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ERMAP	Q96PL5	475 aa	Predicted RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC38A2	Q96QD8	506 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	TSPAN32	Q96QS1	320 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	TIMP4	Q99727	224 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	NDEL1	Q9GZM8	345 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	TXNIP	Q9H3M7	391 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF696	Q9H7X3	374 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	HINT3	Q9NQE9	182 aa	Known RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	RASSF1	Q9NS23	344 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	IMPAD1	Q9NX62	359 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF346	Q9UL40	294 aa	Known RBP	10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	DNAJC13	O75165	2243 aa		10.86	□□□□□ -0.67
MATR3-231	ENST00000502394	KDM4E	B2RXH2	506 aa	Predicted RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	C11orf98	E9PRG8	122 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	SMAD9	O15198	467 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	SEC14L5	O43304	696 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	TRAF3IP2	O43734	574 aa	Predicted RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	CXCL13	O43927	109 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	CCDC159	P0C7I6	412 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	HLA-DOB	P13765	273 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	HIST1H1C	P16403	213 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	GTF2E2	P29084	291 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	SDHA	P31040	664 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	RPL4	P36578	427 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	MLLT10	P55197	1068 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	ACKR1	Q16570	336 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	SMN1	Q16637	294 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	MEST	Q5EB52	335 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC35F1	Q5T1Q4	408 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	ARMC4	Q5T2S8	1044 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	TREML4	Q6UXN2	200 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	PTCHD4	Q6ZW05	846 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	PXK	Q7Z7A4	578 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms