RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 RPH3ALQ9UNE2 315 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 KIF3AQ9Y496 699 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 U3KQV3 271 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ATP8B3O60423 1300 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 PLA2R1Q13018 1463 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 CABIN1Q9Y6J0 2220 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 TCRBV9S1A1TA0A576 114 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 F5H6K3 240 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 POLR2DO15514 142 aaKnown RBP1.31□□□□□ -2.2
SMAD1-203ENST00000502342 ATP5LO75964 103 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 CSF3P09919 207 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 PNMTP11086 282 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 NCF1P14598 390 aaPredicted RBP1.31□□□□□ -2.2
SMAD1-203ENST00000502342 ATP6V1C1P21283 382 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 IL12AP29459 219 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 DDOSTP39656 456 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 MAP3K8P41279 467 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 TNFRSF17Q02223 184 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 KLRC3Q07444 240 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 KLHL30Q0D2K2 578 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 MESDQ14696 234 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 CHRFAM7AQ494W8 412 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 CARD16Q5EG05 197 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 Q5W150 140 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 Q6ZR03 302 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 H2AFVQ71UI9 128 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 CCDC80Q76M96 950 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 PLA2G4DQ86XP0 818 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 OR4D5Q8NGN0 318 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 OR5W2Q8NH69 310 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 OR1F12Q8NHA8 337 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 CD300LFQ8TDQ1 290 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 PELI1Q96FA3 418 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 RNF2Q99496 336 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 RANBP3Q9H6Z4 567 aaPredicted RBP1.31□□□□□ -2.2
SMAD1-203ENST00000502342 NOX3Q9HBY0 568 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 SLC40A1Q9NP59 571 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 SIRT7Q9NRC8 400 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 FARSBQ9NSD9 589 aaKnown RBP1.31□□□□□ -2.2
SMAD1-203ENST00000502342 CALYQ9NYX4 217 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF629Q9UEG4 869 aaPredicted RBP1.31□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF222Q9UK12 451 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 NFASCO94856 1347 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 FANCIQ9NVI1 1328 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 IGSF9BQ9UPX0 1349 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 GPRASP1Q5JY77 1395 aa1.31□□□□□ -2.2
SMAD1-203ENST00000502342 TET2Q6N021 2002 aaPredicted RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 CIB4A0PJX0 185 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 PLAC8L1A1L4L8 177 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 C7orf66A4D0T2 115 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 CCDC182A6NF36 153 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 VAMP5O95183 116 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 RCBTB2O95199 551 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 IGHG4P01861 327 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 DCNP07585 359 aaKnown RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 TLX1NBP0CAT3 122 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 GKN3PP0CG01 181 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 HSMCR30P0CW71 290 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 EPB41P11171 864 aaKnown RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF30P17039 623 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 TCN2P20062 427 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 SLC2A5P22732 501 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 MMP11P24347 488 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 GNA11P29992 359 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 CHI3L1P36222 383 aaPredicted RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 ERVK-25P63136 954 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 ACVR1Q04771 509 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 PLD1Q13393 1074 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 SELPLGQ14242 412 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 FZD2Q14332 565 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 DPYSL2Q16555 572 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 SGCAQ16586 387 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 COX19Q49B96 90 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 HSP90AA5PQ58FG0 334 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 DMRTC1Q5HYR2 192 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 C1orf94Q6P1W5 598 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF880Q6PDB4 577 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 CES3Q6UWW8 571 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 UTS2BQ765I0 119 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 MYOCDQ8IZQ8 938 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 SYT14Q8NB59 555 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 IPMKQ8NFU5 416 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 OR52H1Q8NGJ2 320 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 OSTF1Q92882 214 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 AURKBQ96GD4 344 aaPredicted RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 CLCC1Q96S66 551 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 SECISBP2Q96T21 854 aaKnown RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 CAPS2Q9BXY5 557 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 COQ10BQ9H8M1 238 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 NHEJ1Q9H9Q4 299 aaPredicted RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 CTPS2Q9NRF8 586 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 GIN1Q9NXP7 522 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 PCSK1NQ9UHG2 260 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 GGA2Q9UJY4 613 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 MMP17Q9ULZ9 603 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 AURKCQ9UQB9 309 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 NUP214P35658 2090 aaPredicted RBP1.3□□□□□ -2.2
SMAD1-203ENST00000502342 PIKFYVEQ9Y2I7 2098 aa1.3□□□□□ -2.2
SMAD1-203ENST00000502342 GPR179Q6PRD1 2367 aa1.29□□□□□ -2.2
SMAD1-203ENST00000502342 BTN3A3O00478 584 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms