RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SYPP08247 313 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 STOMP27105 288 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SDHAP31040 664 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 UQCRC1P31930 480 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ADH7P40394 386 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SLC25A1P53007 311 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 CLDN12P56749 244 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 GPLD1P80108 840 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SERTAD2Q14140 314 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 SLC35F3Q8IY50 421 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 PRR22Q8IZ63 422 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF687Q8N1G0 1237 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF433Q8N7K0 673 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ZNF527Q8NB42 609 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 LIPHQ8WWY8 451 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 TSLPQ969D9 159 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 KTI12Q96EK9 354 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 MRPL48Q96GC5 212 aaKnown RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 MS4A3Q96HJ5 214 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 LPAR4Q99677 370 aa8.97□□□□□ -0.97
CLIP1-204ENST00000501271 MRM2Q9UI43 246 aaKnown RBP8.97□□□□□ -0.97
CLIP1-204ENST00000501271 ANKRD61A6NGH8 418 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 LILRA5A6NI73 299 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 H0YIG0 161 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 CTDSPLO15194 276 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 ARHGEF9O43307 516 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 UPK3AO75631 287 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 ALX3O95076 343 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 IGF2P01344 180 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 NME1P15531 152 aaKnown RBP8.96□□□□□ -0.97
CLIP1-204ENST00000501271 CXCL3P19876 107 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 DPP4P27487 766 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 GALNSP34059 522 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 GDNFP39905 211 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 HTR2BP41595 481 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 OR1D4P47884 311 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 RPL18Q07020 188 aaKnown RBP8.96□□□□□ -0.97
CLIP1-204ENST00000501271 ELOCQ15369 112 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 MESTQ5EB52 335 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 NKAIN2Q5VXU1 208 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 BAIAP2L2Q6UXY1 529 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 LINGO2Q7L985 606 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 SLC16A9Q7RTY1 509 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 TIGD4Q8IY51 512 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 OR7G1Q8NGA0 311 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 PHYHIPQ92561 330 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 DNAJA3Q96EY1 480 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 MAP6Q96JE9 813 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 HYLS1Q96M11 299 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 TSPAN32Q96QS1 320 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 CCNL2Q96S94 520 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-204ENST00000501271 ADOQ96SZ5 270 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 PELOQ9BRX2 385 aaKnown RBP8.96□□□□□ -0.97
CLIP1-204ENST00000501271 OR8D2Q9GZM6 311 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 OR51J1Q9H342 316 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 SRA1Q9HD15 236 aaKnown RBP8.96□□□□□ -0.97
CLIP1-204ENST00000501271 PDE7BQ9NP56 450 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 EXOSC3Q9NQT5 275 aaKnown RBP8.96□□□□□ -0.97
CLIP1-204ENST00000501271 MRPL15Q9P015 296 aaKnown RBP8.96□□□□□ -0.97
CLIP1-204ENST00000501271 FER1L5A0AVI2 2057 aa8.96□□□□□ -0.97
CLIP1-204ENST00000501271 CACNA1CQ13936 2221 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 IGHV1OR15-9A0A0B4J2B8 117 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 FITM1A5D6W6 292 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 TLCD2A6NGC4 264 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 TVP23AA6NH52 213 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 ICOSLGO75144 302 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 ABHD16AO95870 558 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 APEHP13798 732 aaKnown RBP8.96□□□□□ -0.98
CLIP1-204ENST00000501271 TACR3P29371 465 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 RPS27P42677 84 aaKnown RBP8.96□□□□□ -0.98
CLIP1-204ENST00000501271 PPICP45877 212 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 EFNA3P52797 238 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 GRM7Q14831 915 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 GSG1Q2KHT4 349 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 TCTE1Q5JU00 501 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 LIPNQ5VXI9 398 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 LYPD8Q6UX82 237 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 FCRLAQ7L513 359 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 SERPINA12Q8IW75 414 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 ADAMTS14Q8WXS8 1223 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 SNAPC3Q92966 411 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 CMTM3Q96MX0 182 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 UCK1Q9HA47 277 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 LIN7BQ9HAP6 207 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 ZFP64Q9NPA5 681 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 FRRS1LQ9P0K9 344 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF222Q9UK12 451 aa8.96□□□□□ -0.98
CLIP1-204ENST00000501271 ASXL3Q9C0F0 2248 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 A0A1B0GTH9 108 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF593O00488 134 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 PDCD5O14737 125 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 WISP1O95388 367 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 GPANK1O95872 356 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF24P17028 368 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF117Q03924 483 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 SNTB2Q13425 540 aaKnown RBP8.95□□□□□ -0.98
CLIP1-204ENST00000501271 ST3GAL2Q16842 350 aa8.95□□□□□ -0.98
CLIP1-204ENST00000501271 DEFB133Q30KQ1 61 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms