RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 NR2F1P10589 423 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 PNMTP11086 282 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 CD79AP11912 226 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 NCF2P19878 526 aaPredicted RBP11.96□□□□□ -0.49
CCDC58-207ENST00000498466 SERPINB5P36952 375 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 ANXA11P50995 505 aaKnown RBP11.96□□□□□ -0.49
CCDC58-207ENST00000498466 CASP8Q14790 479 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 TRMT5Q32P41 509 aaKnown RBP11.96□□□□□ -0.49
CCDC58-207ENST00000498466 ATG16L1Q676U5 607 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 ACSM5Q6NUN0 579 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 C1QL2Q7Z5L3 287 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 LRP11Q86VZ4 500 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 GSPT2Q8IYD1 628 aaKnown RBP11.96□□□□□ -0.49
CCDC58-207ENST00000498466 KIF18AQ8NI77 898 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 UBLCP1Q8WVY7 318 aaPredicted RBP11.96□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF416Q9BWM5 594 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 PPCSQ9HAB8 311 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 ESM1Q9NQ30 184 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 G6PC2Q9NQR9 355 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 FZR1Q9UM11 496 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 A0A096LPI6 279 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 A0A0G2JMP0 313 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 A0A0X1KG70 313 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 A0A1W2PPW3 197 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 CDHR4A6H8M9 788 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF99A8MXY4 864 aaPredicted RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 NPIPB7O75200 414 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 NCR1O76036 304 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 MPZL1O95297 269 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 NAT2P11245 290 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 ADRA2CP18825 462 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 GLRXP35754 106 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 ACAA2P42765 397 aaKnown RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 RPS5P46782 204 aaKnown RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 RPS23P62266 143 aaKnown RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 MRPS11P82912 194 aaKnown RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 GALK2Q01415 458 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 PIGFQ07326 219 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 FOXL1Q12952 345 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 C1DQ13901 141 aaKnown RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 PDCD2Q16342 344 aaPredicted RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 SMU1Q2TAY7 513 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 LIN52Q52LA3 116 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 SPANXN4Q5MJ08 99 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 VRK2Q86Y07 508 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 ZDHHC22Q8N966 263 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 PIK3C3Q8NEB9 887 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 OR4M2Q8NGB6 313 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 MFSD8Q8NHS3 518 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 STK35Q8TDR2 534 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 TMPRSS13Q9BYE2 586 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF665Q9H7R5 613 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 AKTIPQ9H8T0 292 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 DDX28Q9NUL7 540 aaKnown RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 MKS1Q9NXB0 559 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 MYEF2Q9P2K5 600 aaKnown RBP11.95□□□□□ -0.5
CCDC58-207ENST00000498466 SLC17A7Q9P2U7 560 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 DUSP13Q9UII6 198 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
CCDC58-207ENST00000498466 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 FTCDNL1E5RQL4 147 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 M0R3G1 203 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 RP2O75695 350 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF35P13682 527 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 UBA52P62987 128 aaKnown RBP11.94□□□□□ -0.5
CCDC58-207ENST00000498466 TXNL4AP83876 142 aaKnown RBP11.94□□□□□ -0.5
CCDC58-207ENST00000498466 ALKBH6Q3KRA9 238 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF836Q6ZNA1 936 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 TRIML2Q8N7C3 387 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 OR52P1PQ8NH57 321 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 NANPQ8TBE9 248 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 PNPT1Q8TCS8 783 aaKnown RBP11.94□□□□□ -0.5
CCDC58-207ENST00000498466 C22orf15Q8WYQ4 148 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 TESCQ96BS2 214 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 OXGR1Q96P68 337 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 RHOXF2Q9BQY4 288 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF385DQ9H6B1 395 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 B3GNT2Q9NY97 397 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 B3GAT1Q9P2W7 334 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 SEC14L4Q9UDX3 406 aa11.94□□□□□ -0.5
CCDC58-207ENST00000498466 PLPP2O43688 288 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 AKAP8O43823 692 aaKnown RBP11.93□□□□□ -0.5
CCDC58-207ENST00000498466 CDC14BO60729 498 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 SPAG7O75391 227 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 PRG2P13727 222 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF14P17017 642 aaPredicted RBP11.93□□□□□ -0.5
CCDC58-207ENST00000498466 S100A3P33764 101 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 MAGEB1P43366 347 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 PTDSS1P48651 473 aaKnown RBP11.93□□□□□ -0.5
CCDC58-207ENST00000498466 CLNS1AP54105 237 aaKnown RBP11.93□□□□□ -0.5
CCDC58-207ENST00000498466 MVKQ03426 396 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 CHI3L2Q15782 390 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 NKPD1Q17RQ9 610 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 DPY19L1Q2PZI1 675 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 COX20Q5RI15 118 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 AVPI1Q5T686 147 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 DCAF12L2Q5VW00 463 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms