RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 KLHL14Q9P2G3 628 aa7.41□□□□□ -1.22
HMGXB4-207ENST00000498212 B3GAT1Q9P2W7 334 aa7.41□□□□□ -1.22
HMGXB4-207ENST00000498212 GDF2Q9UK05 429 aaPredicted RBP7.41□□□□□ -1.22
HMGXB4-207ENST00000498212 MOKQ9UQ07 419 aa7.41□□□□□ -1.22
HMGXB4-207ENST00000498212 CORINQ9Y5Q5 1042 aa7.41□□□□□ -1.22
HMGXB4-207ENST00000498212 ARFGEF3Q5TH69 2177 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 ARPC4-TTLL3A0A0A6YYG9 625 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 IGHV1-18A0A0C4DH31 117 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 LOC102725191A0A1B0GVB3 256 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 CPSF4LA6NMK7 179 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 RNF223E7ERA6 249 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 ATP6V1G2-DDX39BF2Z307 99 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 MS4A18H0YCH9 400 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 RPL36A-HNRNPH2H7BZ11 118 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 M0R3H8 397 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 FBP2O00757 339 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 CHP2O43745 196 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 SSX4O60224 188 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 FMO6PO60774 539 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 BGLAPP02818 100 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 C8BP07358 591 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 TROVE2P10155 538 aaKnown RBP eCLIP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 PCGF2P35227 344 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 NUDT6P53370 316 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 CDH12P55289 794 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 SH3BGRP55822 239 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 DUSP7Q16829 419 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 TRMT5Q32P41 509 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 MS4A18Q3C1V0 323 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 MMEL1Q495T6 779 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 ENTPD8Q5MY95 495 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 INTS11Q5TA45 600 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 ANKRD16Q6P6B7 361 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 ZNF613Q6PF04 617 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 PATL1Q86TB9 770 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 UEVLDQ8IX04 471 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 GPR137CQ8N3F9 429 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 PIK3C3Q8NEB9 887 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 GPR32P1Q8NGA4 272 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 OR6T1Q8NGN1 323 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 OR10A6Q8NH74 314 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 MAGEE2Q8TD90 523 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 SLC26A7Q8TE54 656 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 BCL2L2Q92843 193 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 SLC41A3Q96GZ6 507 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 ZNF317Q96PQ6 595 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 SLC38A2Q96QD8 506 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 ARHGDIGQ99819 225 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 KCNS3Q9BQ31 491 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 TMEM43Q9BTV4 400 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 MOV10Q9HCE1 1003 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 MRGBPQ9NV56 204 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 FGFR1OP2Q9NVK5 253 aa7.4□□□□□ -1.22
HMGXB4-207ENST00000498212 PLCE1Q9P212 2302 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 A0A096LPE4 126 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 A0A1W2PPZ6 126 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 TRAF3IP2O43734 574 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 MT-ATP6P00846 226 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 CRYAAP02489 173 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 BMP4P12644 408 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 HLA-DOBP13765 273 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 PCSK6P29122 969 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 APOBEC3AP31941 199 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 GZMMP51124 257 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 ARFIP2P53365 341 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 TUBA1BP68363 451 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 TUBA4AP68366 448 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 ARF1P84077 181 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 PPP2R2BQ00005 443 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 POU3F1Q03052 451 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 CHRNB3Q05901 458 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 PUDPQ08623 228 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 PMS2P3Q13401 168 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 CYLC2Q14093 348 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 RAB35Q15286 201 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 NPTX1Q15818 432 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 VMACQ2NL98 169 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 CEACAM16Q2WEN9 425 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 C3orf36Q3SXR2 165 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 NANOGP8Q6NSW7 305 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 TTC33Q6PID6 262 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 LINC00114Q6XXX2 140 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 DNM1P46Q6ZS02 220 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 TUBA1AQ71U36 451 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 C10orf53Q8N6V4 93 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 SCAIQ8N9R8 606 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 MAPK1IP1LQ8NDC0 245 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 VANGL1Q8TAA9 524 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 ADAMTS16Q8TE57 1224 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 RASSF5Q8WWW0 418 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 LRRC58Q96CX6 371 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 MOGAT1Q96PD6 335 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 OR2M2Q96R28 347 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 SH3GL1Q99961 368 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 RHNO1Q9BSD3 238 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 KATNB1Q9BVA0 655 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 REG4Q9BYZ8 158 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 NELFAQ9H3P2 528 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 NANOGQ9H9S0 305 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms