RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TAS2R41P59536 307 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 MS4A2Q01362 244 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 TRAP1Q12931 704 aaKnown RBP13.51□□□□□ -0.25
NUP50-219ENST00000497960 FOXD4Q12950 439 aaPredicted RBP13.51□□□□□ -0.25
NUP50-219ENST00000497960 ALG10BQ5I7T1 473 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 OR7E24Q6IFN5 339 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 PGM2L1Q6PCE3 622 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 C5orf46Q6UWT4 87 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 AAED1Q7RTV5 226 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 FAM86B1Q8N7N1 296 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 ZNF611Q8N823 705 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 AKAP1Q92667 903 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP50-219ENST00000497960 SLC25A36Q96CQ1 311 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 SLC47A1Q96FL8 570 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 PRR14Q9BWN1 585 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 SLC7A8Q9UHI5 535 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 RASD1Q9Y272 281 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 A0A0B4J2E0 115 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 A0A1B0GX12 115 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 OR2T1O43869 369 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 IFNA8P32881 189 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 RPS5P46782 204 aaKnown RBP13.5□□□□□ -0.25
NUP50-219ENST00000497960 TGFBR3Q03167 851 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 ADAM5Q6NVV9 412 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 ZNF613Q6PF04 617 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 ULK3Q6PHR2 472 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 ASRGL1Q7L266 308 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 POMGNT2Q8NAT1 580 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 WFDC11Q8NEX6 87 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 ADAMTS16Q8TE57 1224 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 TMEM171Q8WVE6 324 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 PYURFQ96I23 114 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 PRRC1Q96M27 445 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 POLR2J2Q9GZM3 115 aaKnown RBP13.5□□□□□ -0.25
NUP50-219ENST00000497960 POLR2J3Q9H1A7 115 aaKnown RBP13.5□□□□□ -0.25
NUP50-219ENST00000497960 CXorf56Q9H5V9 222 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 POMPQ9Y244 141 aa13.5□□□□□ -0.25
NUP50-219ENST00000497960 TRAPPC13A5PLN9 417 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 CHP2O43745 196 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 TPST2O60704 377 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 TMCC2O75069 709 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 KRT33AO76009 404 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 P2RY4P51582 365 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 EGR4Q05215 589 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 BSPH1Q075Z2 132 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 ZSCAN26Q16670 478 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 TSPO2Q5TGU0 170 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 C1orf146Q5VVC0 180 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
NUP50-219ENST00000497960 YTHDF3Q7Z739 585 aaKnown RBP13.49□□□□□ -0.25
NUP50-219ENST00000497960 CYP4Z1Q86W10 505 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 SPATA24Q86W54 205 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 ZIC4Q8N9L1 334 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 OR52N5Q8NH56 324 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 KTI12Q96EK9 354 aaPredicted RBP13.49□□□□□ -0.25
NUP50-219ENST00000497960 SLC41A3Q96GZ6 507 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 MUS81Q96NY9 551 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 ZNF385AQ96PM9 386 aaKnown RBP13.49□□□□□ -0.25
NUP50-219ENST00000497960 SEPHS2Q99611 448 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 EPYCQ99645 322 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 PTDSS2Q9BVG9 487 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 AMBRA1Q9C0C7 1298 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 SLCO5A1Q9H2Y9 848 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 SLC7A10Q9NS82 523 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 SLC7A7Q9UM01 511 aa13.49□□□□□ -0.25
NUP50-219ENST00000497960 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
NUP50-219ENST00000497960 TRAV36DV7A0A075B6V5 113 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 TCRBV5S2A0A599 114 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 OR6C65A6NJZ3 312 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 FTCDNL1E5RQL4 147 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 hCG_2039718K7EN88 272 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 PDLIM1O00151 329 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 ACOT8O14734 319 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 FABP3P05413 133 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 ITGA5P08648 1049 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 FOSL1P15407 271 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 PTNP21246 168 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 MPGP29372 298 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 YAP1P46937 504 aaKnown RBP13.48□□□□□ -0.25
NUP50-219ENST00000497960 CDH12P55289 794 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 Q5PR19 223 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 SWT1Q5T5J6 900 aaKnown RBP13.48□□□□□ -0.25
NUP50-219ENST00000497960 FAM69AQ5T7M9 428 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 C9orf135Q5VTT2 229 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 KLHL17Q6TDP4 642 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 SEZ6L2Q6UXD5 910 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 CREB3L2Q70SY1 520 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 C17orf78Q8N4C9 275 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 C1orf162Q8NEQ5 155 aaPredicted RBP13.48□□□□□ -0.25
NUP50-219ENST00000497960 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
NUP50-219ENST00000497960 FBXW5Q969U6 566 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 PERPQ96FX8 193 aa13.48□□□□□ -0.25
NUP50-219ENST00000497960 RSRC1Q96IZ7 334 aaKnown RBP13.48□□□□□ -0.25
NUP50-219ENST00000497960 FAM32AQ9Y421 112 aaKnown RBP13.48□□□□□ -0.25
NUP50-219ENST00000497960 A0A087WUJ7 227 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 AQP12BA6NM10 295 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 J3KTA2 159 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 OR5F1O95221 314 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms