RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PXMP2Q9NR77 195 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DCAF13Q9NV06 445 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 C1orf123Q9NWV4 160 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DUS2Q9NX74 493 aaKnown RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 KLK11Q9UBX7 282 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 TIMM10BQ9Y5J6 103 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 COMMD3-BMI1R4GMX3 469 aa2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 DMBT1Q9UGM3 2413 aaPredicted RBP2.03□□□□□ -2.08
CKS1BP2-201ENST00000497342 ANK1P16157 1881 aa2.03□□□□□ -2.09
CKS1BP2-201ENST00000497342 FRAS1Q86XX4 4008 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 FER1L5A0AVI2 2057 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 MYH8P13535 1937 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SAA2-SAA4A0A096LPE2 208 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 IGHV3-38A0A0C4DH36 116 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 GSTTP1A0A1W2PQM5 241 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ACOD1A6NK06 481 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR2AG2A6NM03 316 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 PP2D1A8MPX8 630 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM220BPB1ANY3 271 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 PRAC2D3DTV9 90 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CFLARO15519 480 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 LATO43561 262 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 TYROBPO43914 113 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CHST1O43916 411 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 STX11O75558 287 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 JCHAINP01591 159 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF853P0CG23 659 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ADORA3P0DMS8 318 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 PRKAR1AP10644 381 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 HSPD1P10809 573 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ANXA3P12429 323 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ETS2P15036 469 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SELEP16581 610 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 TSPAN8P19075 237 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SRMP19623 302 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 IMPDH1P20839 514 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CD82P27701 267 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CD1BP29016 333 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 NMT1P30419 496 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPL9P32969 192 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPL4P36578 427 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 HPCAL1P37235 193 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 C21orf59P57076 290 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CARD18P57730 90 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 DSCR9P59020 149 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ERVK-16P61578 105 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 RND3P61587 244 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 YWHAGP61981 247 aaKnown RBP eCLIP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPL10AP62906 217 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CSNK1G2P78368 415 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SRSF4Q08170 494 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 EIF3IQ13347 325 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 FASTKQ14296 549 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 UPP1Q16831 310 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 MS4A18Q3C1V0 323 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC25A52Q3SY17 297 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 TIGITQ495A1 244 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 VAX1Q5SQQ9 334 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM120AOSQ5T036 256 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM182AQ5T1J6 154 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 PDZK1Q5T2W1 519 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLX4IPQ5VYV7 408 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CLEC6AQ6EIG7 209 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR2A2Q6IF42 318 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 C12orf54Q6X4T0 127 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 RBMS3Q6XE24 437 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 LANCL3Q6ZV70 420 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 STXBP4Q6ZWJ1 553 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SSX9Q7RTT3 188 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 TRPT1Q86TN4 253 aaKnown RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 CATSPERDQ86XM0 798 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 TBC1D10CQ8IV04 446 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 APLFQ8IW19 511 aaPredicted RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 KATNAL2Q8IYT4 538 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC38A6Q8IZM9 456 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 OFCC1Q8IZS5 231 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 PDCL2Q8N4E4 241 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 DNAJC22Q8N4W6 341 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF321PQ8N8H1 164 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 GATSQ8NAP1 163 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR9Q2Q8NGE9 314 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR1L4Q8NGR5 311 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR13F1Q8NGS4 319 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 MAGEE2Q8TD90 523 aaPredicted RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM190Q8WZ59 177 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR1E3Q8WZA6 343 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 DDB2Q92466 427 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 RAPGEF5Q92565 580 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ART4Q93070 314 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 LHX4Q969G2 390 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 EFHD2Q96C19 240 aaPredicted RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 HMCESQ96FZ2 354 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF274Q96GC6 653 aaPredicted RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPRD1AQ96P16 312 aaPredicted RBP2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 GAL3ST1Q99999 423 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM173AQ9BQD7 235 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 GSDMCQ9BYG8 508 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 KRTAP9-4Q9BYQ2 154 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 KRTAP9-2Q9BYQ4 174 aa2.02□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM192AQ9GZU8 254 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms