RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 A6NL46 340 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 RGS5O15539 181 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 GPRIN2O60269 458 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 UMODP07911 640 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 HSD11B1P28845 292 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 DIO1P49895 249 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 RAC1P63000 192 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 GPR50Q13585 617 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 ANKRD34AQ69YU3 496 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 SLC16A9Q7RTY1 509 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 SLC7A5P1Q8MH63 180 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 BEST3Q8N1M1 668 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 LIPHQ8WWY8 451 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 GPX7Q96SL4 187 aaPredicted RBP7.59□□□□□ -1.19
USP54-215ENST00000497106 FUNDC2Q9BWH2 189 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 FOXJ2Q9P0K8 574 aa7.59□□□□□ -1.19
USP54-215ENST00000497106 CENPVL1A0A0U1RR11 272 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 OR5H15A6NDH6 313 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 CLPSP04118 112 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 SCG5P05408 212 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 SPARCP09486 303 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 HSF1Q00613 529 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 PIGFQ07326 219 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 RASGEF1BQ0VAM2 473 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 CBLN3Q6UW01 205 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 ESPNLQ6ZVH7 1005 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 COMMD2Q86X83 199 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 TSEN15Q8WW01 171 aaKnown RBP7.59□□□□□ -1.2
USP54-215ENST00000497106 NSMAFQ92636 917 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 ARHGAP9Q9BRR9 750 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 HDHD5Q9BXW7 423 aa7.59□□□□□ -1.2
USP54-215ENST00000497106 C9orf172C9J069 976 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 EIF1AYO14602 144 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 WBP4O75554 376 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 ZIC2O95409 532 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 MRPL3P09001 348 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 CCL11P51671 97 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 GPR85P60893 370 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 DCTN2Q13561 401 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 SMN1Q16637 294 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 TSEN54Q7Z6J9 526 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 IGFN1Q86VF2 1251 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 MARCH9Q86YJ5 346 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 ZNF676Q8N7Q3 588 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 NANOGP1Q8N7R0 232 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 CYB561A3Q8NBI2 242 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 PHYHIPQ92561 330 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 ABTB1Q969K4 478 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 WDR77Q9BQA1 342 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 FUZQ9BT04 418 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 NIPAL2Q9H841 368 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 WDR76Q9H967 626 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 SEC61A2Q9H9S3 476 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 GALNT9Q9HCQ5 603 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 HINT3Q9NQE9 182 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 CEPT1Q9Y6K0 416 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 CACNA1IQ9P0X4 2223 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 TEX51A0A1B0GUA7 166 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 H2BFMP0C1H6 154 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 NAA10P41227 235 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 UCNP55089 124 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 LSM3P62310 102 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 ZP4Q12836 540 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 THEM4Q5T1C6 240 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 FNDC7Q5VTL7 733 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 ARL9Q6T311 187 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 TMPPEQ6ZT21 453 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 PXKQ7Z7A4 578 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 SYS1Q8N2H4 156 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 OR4Q3Q8NH05 313 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 CPNE4Q96A23 557 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 ZMYND19Q96E35 227 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 CPNE2Q96FN4 548 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 BABAM2Q9NXR7 383 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 HAO2Q9NYQ3 351 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 CLDN16Q9Y5I7 305 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 DOCK9Q9BZ29 2069 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 TRIM64CA6NLI5 447 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 M0R129 80 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 F13BP05160 661 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 LIFP15018 202 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 CAPZA1P52907 286 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 PCBD1P61457 104 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 MFAP5Q13361 173 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 ZNF791Q3KP31 576 aaPredicted RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 LHFPL3Q86UP9 236 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 KIF18BQ86Y91 864 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 OR2V1Q8NHB1 315 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 FAR1Q8WVX9 515 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 BORCS5Q969J3 196 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 TAAR8Q969N4 342 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 TEAD3Q99594 435 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 PLA2G12AQ9BZM1 189 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 TMEM185BQ9H7F4 350 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 MCCC2Q9HCC0 563 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 EXOGQ9Y2C4 368 aaKnown RBP7.58□□□□□ -1.2
USP54-215ENST00000497106 SCN3AQ9NY46 2000 aa7.58□□□□□ -1.2
USP54-215ENST00000497106 ARPC4-TTLL3A0A0A6YYG9 625 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms