RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ALG10Q5BKT4 473 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 MTFR2Q6P444 385 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 SMARCD3Q6STE5 483 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 EPHX4Q8IUS5 362 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 ANKK1Q8NFD2 765 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 OR9K2Q8NGE7 335 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 RBM4BQ9BQ04 359 aaKnown RBP19.38■□□□□ 0.69
C9orf3-222ENST00000496567 RBM4Q9BWF3 364 aaKnown RBP19.38■□□□□ 0.69
C9orf3-222ENST00000496567 MCCC2Q9HCC0 563 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 B3GAT1Q9P2W7 334 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 PHF3Q92576 2039 aaKnown RBP19.38■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF724A8MTY0 619 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 TOXO94900 526 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 NDUFB2O95178 105 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 YES1P07947 543 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 DAPP51397 102 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 SLC34A1Q06495 639 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 TRIP10Q15642 601 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 SNCBQ16143 134 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 C4orf17Q53FE4 359 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF620Q6ZNG0 422 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 FJX1Q86VR8 437 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 MARVELD2Q8N4S9 558 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 MOSPD2Q8NHP6 518 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 FANK1Q8TC84 345 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 RND1Q92730 232 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 INTS12Q96CB8 462 aaKnown RBP19.37■□□□□ 0.69
C9orf3-222ENST00000496567 INIPQ9NRY2 104 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 ING1Q9UK53 422 aaPredicted RBP19.37■□□□□ 0.69
C9orf3-222ENST00000496567 POFUT2Q9Y2G5 429 aa19.37■□□□□ 0.69
C9orf3-222ENST00000496567 HSPB2A8KAH6 182 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 SS18L1O75177 396 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-222ENST00000496567 HPRP00739 348 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 TMIGD3P0DMS9 266 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-222ENST00000496567 HSPB2Q16082 182 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 TMEM201Q5SNT2 666 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 EEF1A1P5Q5VTE0 462 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 KLHL17Q6TDP4 642 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 ZBTB49Q6ZSB9 765 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 CREB3L2Q70SY1 520 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 TUSC5Q8IXB3 177 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 GCNT2Q8N0V5 402 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 CLDN22Q8N7P3 220 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 OR52D1Q9H346 318 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 SMURF2Q9HAU4 748 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 PAPOLBQ9NRJ5 636 aaKnown RBP19.36■□□□□ 0.69
C9orf3-222ENST00000496567 KRT84Q9NSB2 600 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 CLEC4AQ9UMR7 237 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 EMC9Q9Y3B6 208 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 FLVCR1Q9Y5Y0 555 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 CDH10Q9Y6N8 788 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF462Q96JM2 2506 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 A0A1W2PRG6 482 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 LRRTM2O43300 516 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 F13BP05160 661 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 RPL4P36578 427 aaKnown RBP19.36■□□□□ 0.69
C9orf3-222ENST00000496567 PPP2R2BQ00005 443 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 POU3F1Q03052 451 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-222ENST00000496567 RFX4Q33E94 735 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 KDM4DQ6B0I6 523 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 FAM214BQ7L5A3 538 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 CBR4Q8N4T8 237 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 IL20Q9NYY1 176 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 ENOPH1Q9UHY7 261 aa19.36■□□□□ 0.69
C9orf3-222ENST00000496567 DOCK7Q96N67 2140 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 EI24O14681 340 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 CASQ2O14958 399 aaPredicted RBP19.35■□□□□ 0.69
C9orf3-222ENST00000496567 SERPINI2O75830 405 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 HLA-DOBP13765 273 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 DAG1Q14118 895 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 GUSBP1Q15486 140 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 ANKRD34AQ69YU3 496 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 GALNT5Q7Z7M9 940 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 PARP8Q8N3A8 854 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 LRRC75AQ8NAA5 344 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 OR52L1Q8NGH7 329 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 USE1Q9NZ43 259 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 NOSIPQ9Y314 301 aaKnown RBP19.35■□□□□ 0.69
C9orf3-222ENST00000496567 MED12LQ86YW9 2145 aa19.35■□□□□ 0.69
C9orf3-222ENST00000496567 NPIPB13A6NJU9 1138 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 NPIPB4C9JG80 1138 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 AKAP8O43823 692 aaKnown RBP19.34■□□□□ 0.69
C9orf3-222ENST00000496567 OSMP13725 252 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 IGFBP5P24593 272 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 CTSSP25774 331 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 AGTR1P30556 359 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 SLC6A6P31641 620 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 ALDH3A2P51648 485 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 FXYD6P3P58550 94 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 CTXN1P60606 82 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 DPY19L2P2Q6ZN68 376 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 SLC35D2Q76EJ3 337 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 KIF18BQ86Y91 864 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 CNEP1R1Q8N9A8 125 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 MAGEE2Q8TD90 523 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-222ENST00000496567 TMEM45BQ96B21 275 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF775Q96BV0 537 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-222ENST00000496567 GPX7Q96SL4 187 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-222ENST00000496567 SFXN3Q9BWM7 321 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 RASSF4Q9H2L5 321 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms