RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF232Q9UNY5 417 aa12.28□□□□□ -0.44
VARS-228ENST00000495010 ZNF99A8MXY4 864 aaPredicted RBP12.27□□□□□ -0.45
VARS-228ENST00000495010 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
VARS-228ENST00000495010 SEC14L2O76054 403 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 ZNF432O94892 652 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 PNPP00491 289 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 C1QCP02747 245 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 GSNP06396 782 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 IGFBP1P08833 259 aaPredicted RBP12.27□□□□□ -0.45
VARS-228ENST00000495010 GAAP10253 952 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 ANPEPP15144 967 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 LBPP18428 481 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 EPHA1P21709 976 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 COL8A2P25067 703 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 ALDH3B1P43353 468 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 LIMS1P48059 325 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 NME5P56597 212 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 TMEM33P57088 247 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 HILS1P60008 231 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 RPS23P62266 143 aaKnown RBP12.27□□□□□ -0.45
VARS-228ENST00000495010 GALK2Q01415 458 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 IFFO1Q0D2I5 559 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 LRRC74AQ0VAA2 488 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 GSG1Q2KHT4 349 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 ELFN2Q5R3F8 820 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 USP43Q70EL4 1123 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 LRRC34Q8IZ02 419 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 ZNF781Q8N8C0 355 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 SYT3Q9BQG1 590 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 ZNF416Q9BWM5 594 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 RPS6KB2Q9UBS0 482 aa12.27□□□□□ -0.45
VARS-228ENST00000495010 ZNF443Q9Y2A4 671 aaPredicted RBP12.27□□□□□ -0.45
VARS-228ENST00000495010 TRAV20A0A0B4J274 112 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 TMEM247A6NEH6 219 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 ZNF503-AS2A6NEH8 195 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 M0R3G1 203 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 AIM2O14862 343 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 KCNAB3O43448 404 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 ITM2AO43736 263 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 NPIPB7O75200 414 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 HPXP02790 462 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 LSP1P33241 339 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 CRISP3P54108 245 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 MYBPC1Q00872 1141 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 PIGFQ07326 219 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 COX20Q5RI15 118 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 RNF220Q5VTB9 566 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 CARM1Q86X55 608 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 OR52E6Q96RD3 313 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 ZBTB18Q99592 522 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 SUCNR1Q9BXA5 334 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 B3GAT2Q9NPZ5 323 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 ZNF275Q9NSD4 429 aaPredicted RBP12.26□□□□□ -0.45
VARS-228ENST00000495010 ZNF346Q9UL40 294 aaKnown RBP12.26□□□□□ -0.45
VARS-228ENST00000495010 POFUT2Q9Y2G5 429 aa12.26□□□□□ -0.45
VARS-228ENST00000495010 A0A1W2PPW3 197 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 WDR91A4D1P6 747 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 FTCDNL1E5RQL4 147 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 OR2T1O43869 369 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 RAB36O95755 333 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 BCL10O95999 233 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 HLA-HP01893 362 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 BCHEP06276 602 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 PRG2P13727 222 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 GLRXP35754 106 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 CDKN2CP42773 168 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 CRATP43155 626 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 PTDSS1P48651 473 aaKnown RBP12.25□□□□□ -0.45
VARS-228ENST00000495010 RPL14P50914 215 aaKnown RBP12.25□□□□□ -0.45
VARS-228ENST00000495010 SEC24CP53992 1094 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 ABCE1P61221 599 aaKnown RBP12.25□□□□□ -0.45
VARS-228ENST00000495010 CHI3L2Q15782 390 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 GLIPR1L2Q4G1C9 344 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 CARD17Q5XLA6 110 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 SNX32Q86XE0 403 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 KIRREL3Q8IZU9 778 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 CLIP4Q8N3C7 705 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 ZNF837Q96EG3 531 aaPredicted RBP12.25□□□□□ -0.45
VARS-228ENST00000495010 KTI12Q96EK9 354 aaPredicted RBP12.25□□□□□ -0.45
VARS-228ENST00000495010 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 PKNOX2Q96KN3 472 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 OR2M2Q96R28 347 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 SPATA9Q9BWV2 254 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 SLC52A3Q9NQ40 469 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 DUSP13Q9UII6 198 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 IFT52Q9Y366 437 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 RAP2CQ9Y3L5 183 aa12.25□□□□□ -0.45
VARS-228ENST00000495010 LOC105371242A0A075B767 164 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 M0R082 166 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 RFXANKO14593 260 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 ANP32DO95626 131 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 SERPINE1P05121 402 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 NQO1P15559 274 aaKnown RBP12.24□□□□□ -0.45
VARS-228ENST00000495010 UFM1P61960 85 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 MRPS11P82912 194 aaKnown RBP12.24□□□□□ -0.45
VARS-228ENST00000495010 MAD2L1BPQ15013 274 aaPredicted RBP12.24□□□□□ -0.45
VARS-228ENST00000495010 ACSM5Q6NUN0 579 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 ZNF813Q6ZN06 617 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 H1FNTQ75WM6 255 aaPredicted RBP12.24□□□□□ -0.45
VARS-228ENST00000495010 SERPINA11Q86U17 422 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms