RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 C12orf10Q9HB07 376 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 GPR35Q9HC97 309 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 FBXO9Q9UK97 447 aaPredicted RBP19.15■□□□□ 0.66
HDDC3-203ENST00000494993 M0R082 166 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 CLIC1O00299 241 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 AIM2O14862 343 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 OR2T1O43869 369 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 CEACAM16Q2WEN9 425 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 FAM69AQ5T7M9 428 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 C5orf46Q6UWT4 87 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 GPR137CQ8N3F9 429 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 ZNF417Q8TAU3 575 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 SLC38A4Q969I6 547 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 TAAR8Q969N4 342 aa19.14■□□□□ 0.65
HDDC3-203ENST00000494993 ZNF587Q96SQ5 575 aaPredicted RBP19.14■□□□□ 0.65
HDDC3-203ENST00000494993 hCG_2039718K7EN88 272 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 HOXB9P17482 250 aaPredicted RBP19.13■□□□□ 0.65
HDDC3-203ENST00000494993 HNF1AP20823 631 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 THBS4P35443 961 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 SLC18A1P54219 525 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 C1DQ13901 141 aaKnown RBP19.13■□□□□ 0.65
HDDC3-203ENST00000494993 SLC2A7Q6PXP3 512 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 LSMEM1Q8N8F7 131 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 ZNF837Q96EG3 531 aaPredicted RBP19.13■□□□□ 0.65
HDDC3-203ENST00000494993 RSPO3Q9BXY4 272 aaPredicted RBP19.13■□□□□ 0.65
HDDC3-203ENST00000494993 CRLF2Q9HC73 371 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 ANK2Q01484 3957 aa19.13■□□□□ 0.65
HDDC3-203ENST00000494993 IGHV2OR16-5A0A0B4J2B6 119 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 A0A1B0GWA3 101 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 ZNF503-AS2A6NEH8 195 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 VSTM5A8MXK1 200 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 C5orf58C9J3I9 102 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 AKAP8O43823 692 aaKnown RBP19.12■□□□□ 0.65
HDDC3-203ENST00000494993 STAMBPO95630 424 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 TGFAP01135 160 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 ETS2P15036 469 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 NPR2P20594 1047 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 HTR2AP28223 471 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 GRPRP30550 384 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 PRKAR1BP31321 381 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 ARR3P36575 388 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 NPRL3Q12980 569 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 TMEM123Q8N131 208 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 SVOPLQ8N434 492 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 PIK3C3Q8NEB9 887 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 ANKRD27Q96NW4 1050 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 OR2M2Q96R28 347 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 DOK1Q99704 481 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 SOX7Q9BT81 388 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 NKIRAS1Q9NYS0 192 aa19.12■□□□□ 0.65
HDDC3-203ENST00000494993 IGKV1D-42A0A075B6H8 117 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 TRAV36DV7A0A075B6V5 113 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 TRAF3IP2O43734 574 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-203ENST00000494993 ERCC1P07992 297 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-203ENST00000494993 DAOP14920 347 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 GIFP27352 417 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 IL1RL1Q01638 556 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 H1FNTQ75WM6 255 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-203ENST00000494993 SPATA21Q7Z572 469 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 NET1Q7Z628 596 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-203ENST00000494993 MDP1Q86V88 176 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 GOLGA6L1Q8N7Z2 621 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 ADPRHL1Q8NDY3 354 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 NEU4Q8WWR8 484 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-203ENST00000494993 C19orf24Q9BVV8 132 aa19.11■□□□□ 0.65
HDDC3-203ENST00000494993 LOC102725191A0A1B0GVB3 256 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 TMEM129A0AVI4 362 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 ZNF99A8MXY4 864 aaPredicted RBP19.1■□□□□ 0.65
HDDC3-203ENST00000494993 SEC14L2O76054 403 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 ARAFP10398 606 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 SRSF2Q01130 221 aaKnown RBP19.1■□□□□ 0.65
HDDC3-203ENST00000494993 ALG10BQ5I7T1 473 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 DHRS4L2Q6PKH6 230 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 COMTD1Q86VU5 262 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 CCDC36Q8IYA8 594 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 ZCCHC24Q8N2G6 241 aaKnown RBP19.1■□□□□ 0.65
HDDC3-203ENST00000494993 IL17RDQ8NFM7 739 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 NFKBIDQ8NI38 313 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 DNAJA4Q8WW22 397 aaPredicted RBP19.1■□□□□ 0.65
HDDC3-203ENST00000494993 SLC25A37Q9NYZ2 338 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 KLHL14Q9P2G3 628 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 USP22Q9UPT9 525 aa19.1■□□□□ 0.65
HDDC3-203ENST00000494993 LRP5LA4QPB2 252 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 TACSTD2P09758 323 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 CBLP22681 906 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 CAPZA2P47755 286 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 MAGOHP61326 146 aaKnown RBP19.09■□□□□ 0.65
HDDC3-203ENST00000494993 SNTB2Q13425 540 aaKnown RBP19.09■□□□□ 0.65
HDDC3-203ENST00000494993 CR1LQ2VPA4 569 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 PHYHD1Q5SRE7 291 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 GCNT6Q5T4J0 391 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 MSRB3Q8IXL7 192 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 CKAP2Q8WWK9 683 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 NOX3Q9HBY0 568 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 DYNLRB1Q9NP97 96 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 USH1CQ9Y6N9 552 aa19.09■□□□□ 0.65
HDDC3-203ENST00000494993 MS4A18H0YCH9 400 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 M0R3G1 203 aa19.08■□□□□ 0.64
HDDC3-203ENST00000494993 IGFBP1P08833 259 aaPredicted RBP19.08■□□□□ 0.64
HDDC3-203ENST00000494993 MRPL19P49406 292 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms