RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 HPRP00739 348 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 THY1P04216 161 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 HLA-DOBP13765 273 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 CD247P20963 164 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 PCGF2P35227 344 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 ARF1P84077 181 aaKnown RBP13.63□□□□□ -0.23
LIMS2-216ENST00000494613 IL1RL1Q01638 556 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 ROR2Q01974 943 aaKnown RBP13.63□□□□□ -0.23
LIMS2-216ENST00000494613 PMS2P3Q13401 168 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 TRMT5Q32P41 509 aaKnown RBP13.63□□□□□ -0.23
LIMS2-216ENST00000494613 TBRG1Q3YBR2 411 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 ENTPD8Q5MY95 495 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 HMBOX1Q6NT76 420 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 ANKRD16Q6P6B7 361 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 B3GLCTQ6Y288 498 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 CCDC80Q76M96 950 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 CALHM3Q86XJ0 350 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 FBXL14Q8N1E6 418 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 C10orf53Q8N6V4 93 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 ANKK1Q8NFD2 765 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 SLC26A7Q8TE54 656 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 TAMM41Q96BW9 452 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 ZNF837Q96EG3 531 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-216ENST00000494613 TXNDC15Q96J42 360 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 MOGAT1Q96PD6 335 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 TMEM43Q9BTV4 400 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 FKRPQ9H9S5 495 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 GPR35Q9HC97 309 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 OBP2BQ9NPH6 170 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 CBLN4Q9NTU7 201 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 MRGBPQ9NV56 204 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 GDF2Q9UK05 429 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-216ENST00000494613 RCE1Q9Y256 329 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 CORINQ9Y5Q5 1042 aa13.63□□□□□ -0.23
LIMS2-216ENST00000494613 CPSF4LA6NMK7 179 aaKnown RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 PLPP3O14495 311 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 LYPD3O95274 346 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 IGHV4-39P01824 125 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 HEXAP06865 529 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 HOXB1P14653 301 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 NQO1P15559 274 aaKnown RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 ACVR1BP36896 505 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 CRYBA2P53672 197 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 SWT1Q5T5J6 900 aaKnown RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 INTS11Q5TA45 600 aaKnown RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 KLHL24Q6TFL4 600 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 MUC15Q8N387 334 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 GPR137CQ8N3F9 429 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 ADPRHL1Q8NDY3 354 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 VANGL1Q8TAA9 524 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 MAGEE2Q8TD90 523 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 ADAMTS16Q8TE57 1224 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 ZNF583Q96ND8 569 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 ALKBH3Q96Q83 286 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 OR2M2Q96R28 347 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 EMC6Q9BV81 110 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 ASPNQ9BXN1 380 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 MRPL39Q9NYK5 338 aaKnown RBP13.62□□□□□ -0.23
LIMS2-216ENST00000494613 MOKQ9UQ07 419 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 ALPK2Q86TB3 2170 aa13.62□□□□□ -0.23
LIMS2-216ENST00000494613 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 MRASO14807 208 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 TRAF3IP2O43734 574 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-216ENST00000494613 PAX7P23759 505 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 APOBEC3AP31941 199 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-216ENST00000494613 UBE2NP61088 152 aaKnown RBP13.61□□□□□ -0.23
LIMS2-216ENST00000494613 ETFDHQ16134 617 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 COQ5Q5HYK3 327 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 PHYHD1Q5SRE7 291 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 C11orf71Q6IPW1 123 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 TTC33Q6PID6 262 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-216ENST00000494613 WDR88Q6ZMY6 472 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 TSPYL5Q86VY4 417 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-216ENST00000494613 UEVLDQ8IX04 471 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 TMEM123Q8N131 208 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 SCAIQ8N9R8 606 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 PIK3C3Q8NEB9 887 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 OR8J3Q8NGG0 315 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 C10orf82Q8WW14 230 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 NELFAQ9H3P2 528 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 CCDC134Q9H6E4 229 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 CRLF2Q9HC73 371 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 USP22Q9UPT9 525 aa13.61□□□□□ -0.23
LIMS2-216ENST00000494613 ARPC4-TTLL3A0A0A6YYG9 625 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 SLC35F4A4IF30 521 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 TRAPPC13A5PLN9 417 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 RNF223E7ERA6 249 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 FXYD1O00168 92 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 CHP2O43745 196 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 AHCYP23526 432 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 SH3BGRP55822 239 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-216ENST00000494613 TUBA1BP68363 451 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 TUBA4AP68366 448 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 VEZF1Q14119 521 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 RAB35Q15286 201 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 CEACAM16Q2WEN9 425 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 KRTAP21-3Q3LHN1 58 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 CARD17Q5XLA6 110 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 REP15Q6BDI9 236 aa13.6□□□□□ -0.23
LIMS2-216ENST00000494613 ZNF544Q6NX49 715 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms