RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ZNF417Q8TAU3 575 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 RNF217Q8TC41 542 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 MAGEE2Q8TD90 523 aaPredicted RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 STK35Q8TDR2 534 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 BOD1Q96IK1 185 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 OR52B2Q96RD2 323 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 ZNF587Q96SQ5 575 aaPredicted RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 LINC00470Q9BZP3 86 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 CRLF2Q9HC73 371 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 MYOZ1Q9NP98 299 aaPredicted RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 B3GAT1Q9P2W7 334 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 RPS6KB2Q9UBS0 482 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 ZNF232Q9UNY5 417 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 A0A096LPI6 279 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 A0A0G2JPF8 293 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 TMEM129A0AVI4 362 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 TMEM247A6NEH6 219 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 TRPC5OSA6NMA1 111 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 HNRNPCL2B2RXH8 293 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 HNRNPCL3B7ZW38 293 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 M0R3G1 203 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 HNRNPCL1O60812 293 aaKnown RBP10.93□□□□□ -0.66
SKA1-205ENST00000494518 LILRA1O75019 489 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 ZNF432O94892 652 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 IL6P05231 212 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 IGFBP1P08833 259 aaPredicted RBP10.93□□□□□ -0.66
SKA1-205ENST00000494518 ADRA2AP08913 450 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 HNRNPCL4P0DMR1 293 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 IDO1P14902 403 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 CBR1P16152 277 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 HTR2AP28223 471 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 GRPRP30550 384 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 SRP14P37108 136 aaKnown RBP10.93□□□□□ -0.66
SKA1-205ENST00000494518 SH3BGRP55822 239 aaPredicted RBP10.93□□□□□ -0.66
SKA1-205ENST00000494518 MSMPQ1L6U9 139 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 C1QTNF12Q5T7M4 302 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 SLC2A7Q6PXP3 512 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 RINLQ6ZS11 566 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 COMTD1Q86VU5 262 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 NUP37Q8NFH4 326 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 CKAP2Q8WWK9 683 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 TAAR8Q969N4 342 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 ITCHQ96J02 903 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 DOK1Q99704 481 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 EMC6Q9BV81 110 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 RSPO3Q9BXY4 272 aaPredicted RBP10.93□□□□□ -0.66
SKA1-205ENST00000494518 NOX3Q9HBY0 568 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 RCE1Q9Y256 329 aa10.93□□□□□ -0.66
SKA1-205ENST00000494518 A0A1B0GWA3 101 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 TMEM120BA0PK00 339 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 AIM2O14862 343 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 TRAF3IP2O43734 574 aaPredicted RBP10.92□□□□□ -0.66
SKA1-205ENST00000494518 SNNO75324 88 aaPredicted RBP10.92□□□□□ -0.66
SKA1-205ENST00000494518 HPRP00739 348 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 HLA-HP01893 362 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 ZCCHC18P0CG32 403 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 CD79AP11912 226 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 IFNGR1P15260 489 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 TCN1P20061 433 aaPredicted RBP10.92□□□□□ -0.66
SKA1-205ENST00000494518 THBS2P35442 1172 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 POLR2JP52435 117 aaKnown RBP10.92□□□□□ -0.66
SKA1-205ENST00000494518 CHN2P52757 468 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 PIGFQ07326 219 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 DAG1Q14118 895 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 C3orf36Q3SXR2 165 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 TNFAIP8L3Q5GJ75 292 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 WDFY1Q8IWB7 410 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 ZNF540Q8NDQ6 660 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 NFKBIDQ8NI38 313 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 OXGR1Q96P68 337 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 ZNF317Q96PQ6 595 aaPredicted RBP10.92□□□□□ -0.66
SKA1-205ENST00000494518 OR2M2Q96R28 347 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 PARD6BQ9BYG5 372 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 PAIP1Q9H074 479 aaKnown RBP10.92□□□□□ -0.66
SKA1-205ENST00000494518 ARMC7Q9H6L4 198 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 NARFLQ9H6Q4 476 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 ZNF442Q9H7R0 627 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 RMND5AQ9H871 391 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 THAP1Q9NVV9 213 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 ZIM2Q9NZV7 527 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 IFT52Q9Y366 437 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 PCDHB14Q9Y5E9 798 aa10.92□□□□□ -0.66
SKA1-205ENST00000494518 IGKV1D-42A0A075B6H8 117 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 C5orf58C9J3I9 102 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 RPL36A-HNRNPH2H7BZ11 118 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 SERPINI2O75830 405 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 ERCC1P07992 297 aaPredicted RBP10.91□□□□□ -0.66
SKA1-205ENST00000494518 HLA-DOBP13765 273 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 NQO1P15559 274 aaKnown RBP10.91□□□□□ -0.66
SKA1-205ENST00000494518 ITGA2P17301 1181 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 GIFP27352 417 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 AQP5P55064 265 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 SQLEQ14534 574 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 RGNQ15493 299 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 ZSWIM7Q19AV6 140 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 GLIPR1L2Q4G1C9 344 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 CARM1Q86X55 608 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 TMEM123Q8N131 208 aa10.91□□□□□ -0.66
SKA1-205ENST00000494518 C10orf111Q8N326 155 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms