RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TM9SF1O15321 606 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 RAB36O95755 333 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 IGKV3-15P01624 115 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 IGLV1-44P01699 117 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 HLA-HP01893 362 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 CBR1P16152 277 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 IL12AP29459 219 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 LSP1P33241 339 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 ALDH3B1P43353 468 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 PTDSS1P48651 473 aaKnown RBP8.33□□□□□ -1.08
UBR4-216ENST00000494503 P2RY4P51582 365 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 CDH15P55291 814 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 TRMT5Q32P41 509 aaKnown RBP8.33□□□□□ -1.08
UBR4-216ENST00000494503 ALKBH6Q3KRA9 238 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 GTDC1Q4AE62 458 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 RNF220Q5VTB9 566 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 UEVLDQ8IX04 471 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 MIER2Q8N344 545 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 ZNF786Q8N393 782 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 PIK3C3Q8NEB9 887 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 MFSD8Q8NHS3 518 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 ZNF417Q8TAU3 575 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 STK35Q8TDR2 534 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 SLC38A5Q8WUX1 472 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 HPS1Q92902 700 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 KTI12Q96EK9 354 aaPredicted RBP8.33□□□□□ -1.08
UBR4-216ENST00000494503 MS4A3Q96HJ5 214 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 OXGR1Q96P68 337 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 ZNF587Q96SQ5 575 aaPredicted RBP8.33□□□□□ -1.08
UBR4-216ENST00000494503 LINC00470Q9BZP3 86 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 NELFAQ9H3P2 528 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 RMND5AQ9H871 391 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 TPT1P8Q9HAU6 139 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 B3GAT2Q9NPZ5 323 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 SLC6A13Q9NSD5 602 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 CRNNQ9UBG3 495 aaPredicted RBP8.33□□□□□ -1.08
UBR4-216ENST00000494503 REV1Q9UBZ9 1251 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.33□□□□□ -1.086e-8■■□□□ 11.5
UBR4-216ENST00000494503 RCE1Q9Y256 329 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 IFT52Q9Y366 437 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 SPEF1Q9Y4P9 236 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 V9GYY5 206 aaPredicted RBP8.33□□□□□ -1.08
UBR4-216ENST00000494503 ZNF503-AS2A6NEH8 195 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 TRPC5OSA6NMA1 111 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 ZNF99A8MXY4 864 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 SDHDO14521 159 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 PPIHO43447 177 aaKnown RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 LILRA1O75019 489 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 SLC22A3O75751 556 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 IL6P05231 212 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 SAGP10523 405 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 HOXB1P14653 301 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 B4GALT1P15291 398 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 AHCYP23526 432 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 GIFP27352 417 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 GRPRP30550 384 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 GPR6P46095 362 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 POU3F1Q03052 451 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 BST1Q10588 318 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 MAD2L1BPQ15013 274 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 ZSWIM7Q19AV6 140 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 GSG1Q2KHT4 349 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 C3orf36Q3SXR2 165 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 GLIPR1L2Q4G1C9 344 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 AP1ARQ63HQ0 302 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 OGFOD2Q6N063 350 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 UGT2A3Q6UWM9 527 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 ZNF813Q6ZN06 617 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 GLB1L3Q8NCI6 653 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 ICA1LQ8NDH6 482 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 OR6N1Q8NGY5 312 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 MAGEE2Q8TD90 523 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 SLC38A4Q969I6 547 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 MAL2Q969L2 176 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 ZNF837Q96EG3 531 aaPredicted RBP8.32□□□□□ -1.08
UBR4-216ENST00000494503 ITCHQ96J02 903 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 DOK1Q99704 481 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 EMC6Q9BV81 110 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 SPATA9Q9BWV2 254 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 OR51B6Q9H340 312 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 DUSP13Q9UII6 198 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 SLC13A4Q9UKG4 626 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 POFUT2Q9Y2G5 429 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 GRIP1Q9Y3R0 1128 aa8.32□□□□□ -1.08
UBR4-216ENST00000494503 DSPPQ9NZW4 1301 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 A0A0G2JPF8 293 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 ZNF726A6NNF4 738 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 TMEM229AB2RXF0 380 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 HNRNPCL2B2RXH8 293 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 B4DSR2 109 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 HNRNPCL3B7ZW38 293 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 TPD52L2O43399 206 aaKnown RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 SYNGR3O43761 229 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 OR2T1O43869 369 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 HNRNPCL1O60812 293 aaKnown RBP8.31□□□□□ -1.08
UBR4-216ENST00000494503 ZNF432O94892 652 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 TACSTD2P09758 323 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 NUDT7P0C024 238 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 HNRNPCL4P0DMR1 293 aa8.31□□□□□ -1.08
UBR4-216ENST00000494503 IDO1P14902 403 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms