RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 ZNF503-AS2A6NEH8 195 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 SASH3O75995 380 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF432O94892 652 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 F12P00748 615 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 CBLP22681 906 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 AQP1P29972 269 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 SERPINF1P36955 418 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 PDLIM4P50479 330 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 ATP4BP51164 291 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 RGS8P57771 180 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 LOXL1Q08397 574 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 SCARB2Q14108 478 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 SQLEQ14534 574 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 CHRFAM7AQ494W8 412 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 FAM91A1Q658Y4 838 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 H1FNTQ75WM6 255 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 SLC46A3Q7Z3Q1 461 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 TSPYL5Q86VY4 417 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 SNX32Q86XE0 403 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 PTOV1Q86YD1 416 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 HIPK1Q86Z02 1210 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 UEVLDQ8IX04 471 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 CCDC36Q8IYA8 594 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 C10orf53Q8N6V4 93 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF525Q8N782 197 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 OR4F15Q8NGB8 312 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 BCL2L2Q92843 193 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 TMEM38AQ9H6F2 299 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 MYOZ1Q9NP98 299 aaPredicted RBP11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 B3GAT2Q9NPZ5 323 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 CA10Q9NS85 328 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 CORINQ9Y5Q5 1042 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 PLCE1Q9P212 2302 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 ABCA2Q9BZC7 2435 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 B9A039 149 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 LRRN3E7EW58 273 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 RPL36A-HNRNPH2H7BZ11 118 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 M0R082 166 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 NDUFS8O00217 210 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 PDE5AO76074 875 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 LY6HO94772 140 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 HPRP00739 348 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 GPX2P18283 190 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 CAPZA2P47755 286 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 NPTX1Q15818 432 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 MST1LQ2TV78 715 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 TMEM249Q2WGJ8 235 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 RUNDC3AQ59EK9 446 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 PHYHD1Q5SRE7 291 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 VHLLQ6RSH7 139 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 ARMC8Q8IUR7 673 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 FAM169BQ8N8A8 192 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 HIPK4Q8NE63 616 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 IL17RDQ8NFM7 739 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 GPR32P1Q8NGA4 272 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 OR6S1Q8NH40 331 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF417Q8TAU3 575 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 CKAP2Q8WWK9 683 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF587Q96SQ5 575 aaPredicted RBP11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 VRK1Q99986 396 aaPredicted RBP11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 KLHL14Q9P2G3 628 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 LEF1Q9UJU2 399 aaPredicted RBP11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 TRIM33Q9UPN9 1127 aa11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 YLPM1P49750 1951 aaKnown RBP11.66□□□□□ -0.54
CTDSP1-212ENST00000494067 CSPG4Q6UVK1 2322 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 LOC102725191A0A1B0GVB3 256 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 GPRIN2O60269 458 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 OPN1SWP03999 348 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 THY1P04216 161 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 HLA-DOBP13765 273 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 H2AFXP16104 143 aaPredicted RBP11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 CBR1P16152 277 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 USF1P22415 310 aaPredicted RBP11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 GRPRP30550 384 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 ARR3P36575 388 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 PCBP3P57721 371 aaKnown RBP11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 MTPNP58546 118 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 ARF1P84077 181 aaKnown RBP11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 VLDLRP98155 873 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 NAAAQ02083 359 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 CEACAM16Q2WEN9 425 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 NHLRC1Q6VVB1 395 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF540Q8NDQ6 660 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 OR4D11Q8NGI4 311 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 C10orf105Q8TEF2 133 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 ANKRD27Q96NW4 1050 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 RAB1BQ9H0U4 201 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 CRLF2Q9HC73 371 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 GPR35Q9HC97 309 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 INTS9Q9NV88 658 aaKnown RBP11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 CRNNQ9UBG3 495 aaPredicted RBP11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 CDC42EP3Q9UKI2 254 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 NDUFAF1Q9Y375 327 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 SVEP1Q4LDE5 3571 aa11.65□□□□□ -0.54
CTDSP1-212ENST00000494067 A0A087WUJ7 227 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms