RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SLC37A1P57057 533 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SNRPD2P62316 118 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 PPP3R1P63098 170 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 RELQ04864 619 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 TGM3Q08188 693 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 TP53BP2Q13625 1128 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SNTB1Q13884 538 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SERTAD2Q14140 314 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 LARS2Q15031 903 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 GLYR1Q49A26 553 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 TEX30Q5JUR7 227 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SAXO2Q658L1 398 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SEM1Q6ZVN7 128 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 KRT77Q7Z794 578 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 CCDC36Q8IYA8 594 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 LIX1Q8N485 282 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF441Q8N8Z8 693 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 OR5M3Q8NGP4 307 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 OR9I1Q8NGQ6 314 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 OR6S1Q8NH40 331 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 RHEBL1Q8TAI7 183 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 NRGNQ92686 78 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 COQ8BQ96D53 544 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 PHF21BQ96EK2 531 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 DGAT2Q96PD7 388 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 OR2M2Q96R28 347 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 NPAS1Q99742 590 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF251Q9BRH9 671 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 DDX31Q9H8H2 851 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 IPPKQ9H8X2 491 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 ANKRA2Q9H9E1 313 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 PRM3Q9NNZ6 103 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 CHST11Q9NPF2 352 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SDHAF3Q9NRP4 125 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SDHAF2Q9NX18 166 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 COA4Q9NYJ1 87 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 CNOT2Q9NZN8 540 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 MLXQ9UH92 298 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 TMEFF2Q9UIK5 374 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 PCTPQ9UKL6 214 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 DTX4Q9Y2E6 619 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 GPR45Q9Y5Y3 372 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 CHCHD2Q9Y6H1 151 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 VPS13CQ709C8 3753 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 DOCK7Q96N67 2140 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 A0A0G2JNJ9 132 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 A0A1B0GVC2 190 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 A8MXK9 166 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 FAM220BPB1ANY3 271 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 INMT-MINDY4F8WBC2 141 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 GPR75O95800 540 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 CSF3P09919 207 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 H2AFB2P0C5Z0 115 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 TSPAN19P0C672 248 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ACSM4P0C7M7 580 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 GLI4P10075 376 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 S1PR1P21453 382 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ELAVL4P26378 380 aaKnown RBP7.41□□□□□ -1.22
HDAC6-234ENST00000493923 KIR2DL3P43628 341 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 AKR1D1P51857 326 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 TLE4Q04727 773 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 FGL1Q08830 312 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 MGAT2Q10469 447 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 EXOSC2Q13868 293 aaKnown RBP7.41□□□□□ -1.22
HDAC6-234ENST00000493923 IRF3Q14653 427 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 EBPQ15125 230 aaKnown RBP7.41□□□□□ -1.22
HDAC6-234ENST00000493923 POU4F3Q15319 338 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF79Q15937 498 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 MPEG1Q2M385 716 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 PYDC2Q56P42 97 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 SGO1Q5FBB7 561 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 PABPC1L2AQ5JQF8 200 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 FNDC7Q5VTL7 733 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 LIPJQ5W064 366 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 FAM180BQ6P0A1 224 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 SLC27A4Q6P1M0 643 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF585AQ6P3V2 769 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ARHGAP11AQ6P4F7 1023 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 FAM111BQ6SJ93 734 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 BEND4Q6ZU67 534 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 UTS2BQ765I0 119 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 RHOUQ7L0Q8 258 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 PRR22Q8IZ63 422 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 STPG2Q8N412 459 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ATG16L2Q8NAA4 619 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 OR2T12Q8NG77 320 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 OR1M1Q8NGA1 313 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 OR4F6Q8NGB9 312 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 NUBPLQ8TB37 319 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 PAQR8Q8TEZ7 354 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 TWIST2Q8WVJ9 160 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 UBE2E3Q969T4 207 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 SPACA9Q96E40 222 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ART5Q96L15 291 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 Q96MT0 163 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 GAL3ST4Q96RP7 486 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 HBEGFQ99075 208 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 ZBTB18Q99592 522 aa7.41□□□□□ -1.22
HDAC6-234ENST00000493923 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms