RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 DRAXINQ8NBI3 349 aaPredicted RBP3.56□□□□□ -1.84
GTF3A-208ENST00000493903 OR4A4PQ8NGN8 299 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 PLPPR1Q8TBJ4 325 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 DTX3LQ8TDB6 740 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 NR4A3Q92570 626 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 DUX3Q96PT4 197 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 CHCHD5Q9BSY4 110 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 CCDC28BQ9BUN5 200 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 TEKT3Q9BXF9 490 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 FGFBP2Q9BYJ0 223 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 TUBB1Q9H4B7 451 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 JPT2Q9H910 190 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 CAB39LQ9H9S4 337 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 TIGARQ9NQ88 270 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 PAK1IP1Q9NWT1 392 aaPredicted RBP3.56□□□□□ -1.84
GTF3A-208ENST00000493903 SPRR3Q9UBC9 169 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 RPL36Q9Y3U8 105 aaKnown RBP3.56□□□□□ -1.84
GTF3A-208ENST00000493903 FMN2Q9NZ56 1722 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 KIF1AQ12756 1690 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 RREB1Q92766 1687 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 NAIPQ13075 1403 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 PLEKHH1Q9ULM0 1364 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 KCNE1BA0A087WTH5 132 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 KBTBD11-OT1A0A1B0GTJ5 212 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 OR5B21A6NL26 309 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 ZNF487B1APH4 448 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 ZNF879B4DU55 563 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 PRR23D1E9PI22 279 aaPredicted RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 K7ENP7 123 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 KIF2AO00139 706 aaPredicted RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 CHST1O43916 411 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 SCRG1O75711 98 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 OR7A10O76100 309 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 DUS4LO95620 317 aaKnown RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 POP4O95707 220 aaKnown RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 OXSR1O95747 527 aaPredicted RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 TRIM49P0CI25 452 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 TRIM49CP0CI26 452 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 PRR23D2P0DMB1 279 aaPredicted RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 CALCRP30988 508 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 PLK1P53350 603 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 CLDN18P56856 261 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 ZFP36L1Q07352 338 aaKnown RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 ITIH4Q14624 930 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 ABRAXAS2Q15018 415 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 MRPL23Q16540 153 aaKnown RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 TMEM30BQ3MIR4 351 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 HSDL1Q3SXM5 330 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 XKR4Q5GH76 650 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 ZNF506Q5JVG8 444 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 C22orf42Q6IC83 251 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 HSDL2Q6YN16 418 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 C19orf35Q6ZS72 473 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 VRK2Q86Y07 508 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 MMAAQ8IVH4 418 aaKnown RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 C9orf40Q8IXQ3 194 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 Q8NBF4 154 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 ZNF707Q96C28 371 aaPredicted RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 FBXO17Q96EF6 278 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 OXGR1Q96P68 337 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 LITAFQ99732 161 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 MRPL37Q9BZE1 423 aaKnown RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 RBKSQ9H477 322 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 SDF2L1Q9HCN8 221 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 AHSPQ9NZD4 102 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 STOX2Q9P2F5 926 aaPredicted RBP3.55□□□□□ -1.84
GTF3A-208ENST00000493903 CTSZQ9UBR2 303 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 CLN8Q9UBY8 286 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 NUP188Q5SRE5 1749 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 KNDC1Q76NI1 1749 aa3.55□□□□□ -1.84
GTF3A-208ENST00000493903 CCDC144AA2RUR9 1427 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 TNS3Q68CZ2 1445 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 NUP155O75694 1391 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 PPLO60437 1756 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 CRYBG1Q9Y4K1 1723 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 TUBAL3A6NHL2 446 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 VSTM2BA6NLU5 285 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 CCT8L1PA6NM43 557 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 A8MXK9 166 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 SIRPB1O00241 398 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 SOCS3O14543 225 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 NDUFAB1O14561 156 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 POLR3GO15318 223 aaPredicted RBP3.54□□□□□ -1.84
GTF3A-208ENST00000493903 UGT1A9O60656 530 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 GPX5O75715 221 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 GJB5O95377 273 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 C1orf105O95561 183 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 ALDOBP05062 364 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 MYL2P10916 166 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 ABOP16442 354 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 FOXN2P32314 431 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 NAA10P41227 235 aaPredicted RBP3.54□□□□□ -1.84
GTF3A-208ENST00000493903 RPL29P47914 159 aaKnown RBP3.54□□□□□ -1.84
GTF3A-208ENST00000493903 MRPL19P49406 292 aaKnown RBP3.54□□□□□ -1.84
GTF3A-208ENST00000493903 HMGCS2P54868 508 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 MRPS22P82650 360 aaKnown RBP3.54□□□□□ -1.84
GTF3A-208ENST00000493903 TLE4Q04727 773 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 SLC10A7Q0GE19 358 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 ILKQ13418 452 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 HNRNPA1L2Q32P51 320 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms