RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FARSBQ9NSD9 589 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 TEX10Q9NXF1 929 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 NINJ2Q9NZG7 142 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 SPATA7Q9P0W8 599 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CPSF2Q9P2I0 782 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 ZNF282Q9UDV7 671 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 FBXW2Q9UKT8 454 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 ZNF490Q9ULM2 529 aaPredicted RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 NPIPA1Q9UND3 350 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 PADI2Q9Y2J8 665 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 RNF11Q9Y3C5 154 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 WIF1Q9Y5W5 379 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CSMD2Q7Z408 3487 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 TANC2Q9HCD6 1990 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 DCHS2Q6V1P9 2916 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 CSMD1Q96PZ7 3565 aa2.54□□□□□ -2
PTCD3-218ENST00000493430 FLNAP21333 2647 aaKnown RBP2.54□□□□□ -2
PTCD3-218ENST00000493430 USF3Q68DE3 2245 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 IGLV3-12A0A075B6K2 115 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FAM159BA6NKW6 160 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 E7ESA3 106 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 PTGES3LE9PB15 166 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 GALR3O60755 368 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 DPM1O60762 260 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 OR6B1O95007 311 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 HPP00738 406 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CLPSP04118 112 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 SHBGP04278 402 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ANXA5P08758 320 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 RHOXF2BP0C7M4 288 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CCL3P10147 92 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 EZRP15311 586 aaKnown RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 PRKACGP22612 351 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 GCAP28676 217 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 PSMB10P40306 273 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 SOX3P41225 446 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 TRPC1P48995 793 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FNTAP49354 379 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CAMPP49913 170 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CDH13P55290 713 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FOXA1P55317 472 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 OR4D2P58180 307 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 HERVK_113P63132 956 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ERVK-8P63133 956 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 BTN3A2P78410 334 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 GUCY2DQ02846 1103 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 AIMP2Q13155 320 aaKnown RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 CHIT1Q13231 466 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 DOC2AQ14183 400 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 EXOSC7Q15024 291 aaKnown RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 OR1C1Q15619 314 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 MOGAT2Q3SYC2 334 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 HIGD2BQ4VC39 106 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FHL5Q5TD97 284 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 LYPLAL1Q5VWZ2 237 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 DUPD1Q68J44 220 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ANKRD26P1Q6NSI1 321 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FAM45BPQ6NSW5 357 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 RPUSD3Q6P087 351 aaKnown RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 TMEM205Q6UW68 189 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ISLR2Q6UXK2 745 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FRA10AC1Q70Z53 315 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CPEB2Q7Z5Q1 589 aaKnown RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 HMGN2P46Q86SG4 172 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 HPS6Q86YV9 775 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 TICAM1Q8IUC6 712 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CNTN4Q8IWV2 1026 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 IQCKQ8N0W5 287 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 TAGAPQ8N103 731 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CLEC1AQ8NC01 280 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 MDS2Q8NDY4 140 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 NFAM1Q8NET5 270 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 SPATA4Q8NEY3 305 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 NUP37Q8NFH4 326 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CDC26Q8NHZ8 85 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 VANGL1Q8TAA9 524 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 FBXO30Q8TB52 745 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FAM45AQ8TCE6 357 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 MIPOL1Q8TD10 442 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 HEXDCQ8WVB3 486 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 SLC13A3Q8WWT9 602 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ITLN2Q8WWU7 325 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 RERGQ96A58 199 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 MS4A6EQ96DS6 147 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 TM4SF19Q96DZ7 209 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FAM120BQ96EK7 910 aaKnown RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 DNAJA3Q96EY1 480 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 FOPNLQ96NB1 174 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 NAP1L3Q99457 506 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 RHOXF2Q9BQY4 288 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ERVK-6Q9BXR3 956 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 EBPLQ9BY08 206 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 MS4A8Q9BY19 250 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ZNF717Q9BY31 904 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 FRMD8P1Q9BZ68 369 aaPredicted RBP2.53□□□□□ -2
PTCD3-218ENST00000493430 OR8D2Q9GZM6 311 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 LIME1Q9H400 295 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 RHOJQ9H4E5 214 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 ANKHQ9HCJ1 492 aa2.53□□□□□ -2
PTCD3-218ENST00000493430 CHST11Q9NPF2 352 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms