RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 TMEM120AQ9BXJ8 343 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 DENND2DQ9H6A0 471 aaPredicted RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 KAT8Q9H7Z6 458 aaKnown RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 MYOZ1Q9NP98 299 aaPredicted RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 KLHL14Q9P2G3 628 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 STX18Q9P2W9 335 aaKnown RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 USP22Q9UPT9 525 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 A0A1W2PR80 420 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 TRAPPC13A5PLN9 417 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 H7C417 338 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 M0QX08 132 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 NDUFAB1O14561 156 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 FZD7O75084 574 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 PDE5AO76074 875 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 LY6G6DO95868 133 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 LGI1O95970 557 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 NR2C1P13056 603 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 SLC25A16P16260 332 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 MTPNP58546 118 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 EGR4Q05215 589 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 DMTNQ08495 405 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 NPTX1Q15818 432 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 VMACQ2NL98 169 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 ARPINQ7Z6K5 226 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 PXKQ7Z7A4 578 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 EPHX4Q8IUS5 362 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 WDR31Q8NA23 367 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 OR6N1Q8NGY5 312 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 OR10A6Q8NH74 314 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 LZICQ8WZA0 190 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 TAAR8Q969N4 342 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 PTDSS2Q9BVG9 487 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 C1QTNF6Q9BXI9 259 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 CACNG6Q9BXT2 260 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 MED4Q9NPJ6 270 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 SLC52A3Q9NQ40 469 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 POFUT2Q9Y2G5 429 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 CHST2Q9Y4C5 530 aa11.9□□□□□ -0.5
IRF1-210ENST00000493208 SETD2Q9BYW2 2564 aaPredicted RBP11.89□□□□□ -0.51
IRF1-210ENST00000493208 ARID1AO14497 2285 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 HTR3EA5X5Y0 456 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 ZNF99A8MXY4 864 aaPredicted RBP11.89□□□□□ -0.51
IRF1-210ENST00000493208 TLX2O43763 284 aaPredicted RBP11.89□□□□□ -0.51
IRF1-210ENST00000493208 HTR2AP28223 471 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 NTF4P34130 210 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 P2RY4P51582 365 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 PCBP3P57721 371 aaKnown RBP11.89□□□□□ -0.51
IRF1-210ENST00000493208 POU3F1Q03052 451 aaPredicted RBP11.89□□□□□ -0.51
IRF1-210ENST00000493208 TNK1Q13470 666 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 ADRM1Q16186 407 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 HIKESHIQ53FT3 197 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 ZNF540Q8NDQ6 660 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 OR5J2Q8NH18 312 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 ARHGDIGQ99819 225 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 REG4Q9BYZ8 158 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 NANSQ9NR45 359 aa11.89□□□□□ -0.51
IRF1-210ENST00000493208 MAP1AP78559 2803 aaPredicted RBP11.89□□□□□ -0.51
IRF1-210ENST00000493208 RAI1Q7Z5J4 1906 aaPredicted RBP11.88□□□□□ -0.51
IRF1-210ENST00000493208 B9A039 149 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 E7EQL1 145 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 MRASO14807 208 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 SSX4O60224 188 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 TPST1O60507 370 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 CCDC22O60826 627 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 FARS2O95363 451 aaKnown RBP11.88□□□□□ -0.51
IRF1-210ENST00000493208 ADORA3P0DMS8 318 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 UMPSP11172 480 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 SERPINF1P36955 418 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 EFNA4P52798 201 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 CDH12P55289 794 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 TAS2R41P59536 307 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 ENTPD8Q5MY95 495 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 DPPA2Q7Z7J5 298 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 ADAMTS16Q8TE57 1224 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 BCL2L2Q92843 193 aaPredicted RBP11.88□□□□□ -0.51
IRF1-210ENST00000493208 LRRC58Q96CX6 371 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 SLC41A3Q96GZ6 507 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 ULBP2Q9BZM5 246 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 IKZF5Q9H5V7 419 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 ZNF385DQ9H6B1 395 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 ZNF229Q9UJW7 825 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 MOKQ9UQ07 419 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 CAPN7Q9Y6W3 813 aa11.88□□□□□ -0.51
IRF1-210ENST00000493208 A0A096LPE4 126 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 A0A1W2PPZ6 126 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 GMNCA6NCL1 334 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 CPSF4LA6NMK7 179 aaKnown RBP11.87□□□□□ -0.51
IRF1-210ENST00000493208 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 ATP6V1G2-DDX39BF2Z307 99 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 M0R3G1 203 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 NDUFS8O00217 210 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 RNF13O43567 381 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 MGRN1O60291 552 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 UPK3AO75631 287 aa11.87□□□□□ -0.51
IRF1-210ENST00000493208 ZNF432O94892 652 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms