RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 SLC46A3Q7Z3Q1 461 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 NANOGNBQ7Z5D8 188 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 LRRC17Q8N6Y2 441 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 S100PBPQ96BU1 408 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 CCDC124Q96CT7 223 aaKnown RBP11.29□□□□□ -0.6
CLIP2-209ENST00000493166 SGTBQ96EQ0 304 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 CLPTM1LQ96KA5 538 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 C7orf34Q96L11 122 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 SLC7A10Q9NS82 523 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 MAN2C1Q9NTJ4 1040 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 C20orf141Q9NUB4 165 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 NDUFAF4Q9P032 175 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 MALT1Q9UDY8 824 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 NOX1Q9Y5S8 564 aa11.29□□□□□ -0.6
CLIP2-209ENST00000493166 PRR14LQ5THK1 2151 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 OR6C65A6NJZ3 312 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 TRAF3IP2O43734 574 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 SERPINI2O75830 405 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 OR7A10O76100 309 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 H1F0P07305 194 aaKnown RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 ASAH2BP0C7U1 165 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 HLA-DOBP13765 273 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 FUT4P22083 530 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 DNAJA1P31689 397 aaKnown RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 TRIM25Q14258 630 aaKnown RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 TSPO2Q5TGU0 170 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 ZNF730Q6ZMV8 503 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 ABHD12BQ7Z5M8 362 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 TSEN54Q7Z6J9 526 aaKnown RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 PXKQ7Z7A4 578 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 DHFR2Q86XF0 187 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 ZNF433Q8N7K0 673 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 PIK3C3Q8NEB9 887 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 ACOT11Q8WXI4 607 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 ASB9Q96DX5 294 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 BTBD10Q9BSF8 475 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 ANKRD19PQ9H560 264 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 NMNAT1Q9HAN9 279 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-209ENST00000493166 TAS2R16Q9NYV7 291 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 CSMD2Q7Z408 3487 aa11.28□□□□□ -0.6
CLIP2-209ENST00000493166 CIB4A0PJX0 185 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 HTR3EA5X5Y0 456 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 BLOC1S5-TXNDC5H3BN57 136 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 RNF13O43567 381 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 SLC43A1O75387 559 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 CTAG2O75638 210 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 RAD51DO75771 328 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 DIRAS1O95057 198 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 GOSR1O95249 250 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 SEMG1P04279 462 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 FABP3P05413 133 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 SAGP10523 405 aaPredicted RBP11.27□□□□□ -0.61
CLIP2-209ENST00000493166 IFI30P13284 250 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 FUT1P19526 365 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 CRYGSP22914 178 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 BNIP1Q12981 228 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 STK11Q15831 433 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 FGD3Q5JSP0 725 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 C9orf135Q5VTT2 229 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 LCN8Q6JVE9 175 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 ALKBH2Q6NS38 261 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 C22orf34Q6ZV56 151 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 MBOAT2Q6ZWT7 520 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 RRM2BQ7LG56 351 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 NRMQ8IXM6 262 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 RNF113BQ8IZP6 322 aaKnown RBP11.27□□□□□ -0.61
CLIP2-209ENST00000493166 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 SLC7A6OSQ96CW6 309 aaPredicted RBP11.27□□□□□ -0.61
CLIP2-209ENST00000493166 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 LRGUKQ96M69 825 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 ALKBH3Q96Q83 286 aaPredicted RBP11.27□□□□□ -0.61
CLIP2-209ENST00000493166 PIP5K1AQ99755 562 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 RASSF1Q9NS23 344 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 PDZD2O15018 2839 aa11.27□□□□□ -0.61
CLIP2-209ENST00000493166 HEATR1Q9H583 2144 aaKnown RBP11.26□□□□□ -0.61
CLIP2-209ENST00000493166 A0A087WUU8 490 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 A0A1W2PRQ8 180 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 ZNF587BE7ETH6 402 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 PDLIM1O00151 329 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 DNAJC8O75937 253 aaPredicted RBP11.26□□□□□ -0.61
CLIP2-209ENST00000493166 ATP5HO75947 161 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 ZNF432O94892 652 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 THBDP07204 575 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 ITGA5P08648 1049 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 MPGP29372 298 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 RASSF2P50749 326 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 FOXG1P55316 489 aaPredicted RBP11.26□□□□□ -0.61
CLIP2-209ENST00000493166 LSM11P83369 360 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLIP2-209ENST00000493166 MS4A2Q01362 244 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 SPIBQ01892 262 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 TGFBR3Q03167 851 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 PRKCDQ05655 676 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 RPL18Q07020 188 aaKnown RBP11.26□□□□□ -0.61
CLIP2-209ENST00000493166 LGALS3BPQ08380 585 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 ZP4Q12836 540 aa11.26□□□□□ -0.61
CLIP2-209ENST00000493166 DGCR6Q14129 220 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms