RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161		A0A0A6YYJ9	748 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	SLCO1B7	G3V0H7	640 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161		M0R3G1	203 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	SYNGR3	O43761	229 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	SLC43A1	O75387	559 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	AVP	P01185	164 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	SERPINE1	P05121	402 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	BCHE	P06276	602 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	MYZAP	P0CAP1	466 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF43	P17038	809 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	LBP	P18428	481 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	GPR6	P46095	362 aa	Predicted RBP	11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	COMP	P49747	757 aa	Predicted RBP	11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	RPL14	P50914	215 aa	Known RBP	11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	PIGF	Q07326	219 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	DPY19L1	Q2PZI1	675 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	CARD17	Q5XLA6	110 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	LRRC34	Q8IZ02	419 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	TMEM123	Q8N131	208 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	GPR137C	Q8N3F9	429 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	RIBC1	Q8N443	379 aa	Predicted RBP	11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	C3orf56	Q8N813	242 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	ANKK1	Q8NFD2	765 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	STK35	Q8TDR2	534 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	SLC38A5	Q8WUX1	472 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF75A	Q96N20	296 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	OXGR1	Q96P68	337 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	LRRC37B	Q96QE4	947 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	MOV10	Q9HCE1	1003 aa	Known RBP	11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	PNPO	Q9NVS9	261 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	RAP2C	Q9Y3L5	183 aa		11.77	□□□□□ -0.53
SAMM50-204	ENST00000493161	TMEM89	A2RUT3	159 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF99	A8MXY4	864 aa	Predicted RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161		M0R082	166 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161		M0R233	179 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	NCR1	O76036	304 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	HPR	P00739	348 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	MSMB	P08118	114 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	GAA	P10253	952 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	SAG	P10523	405 aa	Predicted RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF35	P13682	527 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	HLA-DOB	P13765	273 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	PCMT1	P22061	227 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	CBL	P22681	906 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	ANXA11	P50995	505 aa	Known RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	AQP5	P55064	265 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	LMO4	P61968	165 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	POU3F1	Q03052	451 aa	Predicted RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	C1D	Q13901	141 aa	Known RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	GTDC1	Q4AE62	458 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	RNF220	Q5VTB9	566 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	UGT2A3	Q6UWM9	527 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	PEG10	Q86TG7	708 aa	Known RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	TRIML2	Q8N7C3	387 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF417	Q8TAU3	575 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	GCDH	Q92947	438 aa	Predicted RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	TAAR8	Q969N4	342 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	AIG1	Q9NVV5	245 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF224	Q9NZL3	707 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	USP22	Q9UPT9	525 aa		11.76	□□□□□ -0.53
SAMM50-204	ENST00000493161	LOC105371242	A0A075B767	164 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161		A0A096LPI6	279 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	TRAF3IP2	O43734	574 aa	Predicted RBP	11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	NAT2	P11245	290 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	CD79A	P11912	226 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	ZNF14	P17017	642 aa	Predicted RBP	11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	CRAT	P43155	626 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	SLC1A6	P48664	564 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	EVX1	P49640	407 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	TXNL4A	P83876	142 aa	Known RBP	11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	SLC9B1	Q4ZJI4	515 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	OGFOD2	Q6N063	350 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	IL17RD	Q8NFM7	739 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	FAM216A	Q8WUB2	273 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	RDH5	Q92781	318 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	FAHD2A	Q96GK7	314 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	TMEM19	Q96HH6	336 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	EMC6	Q9BV81	110 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	SPATA9	Q9BWV2	254 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	MEAF6	Q9HAF1	191 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	P2RX2	Q9UBL9	471 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	PCDHB10	Q9UN67	800 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	GPR45	Q9Y5Y3	372 aa		11.75	□□□□□ -0.53
SAMM50-204	ENST00000493161	IGKV1D-42	A0A075B6H8	117 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	MS4A18	H0YCH9	400 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	SDHD	O14521	159 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	RFXANK	O14593	260 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	FZD7	O75084	574 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	RP2	O75695	350 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	NUDT7	P0C024	238 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	BGN	P21810	368 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	ACHE	P22303	614 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	GRPR	P30550	384 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	CRISP3	P54108	245 aa		11.74	□□□□□ -0.53
SAMM50-204	ENST00000493161	HILS1	P60008	231 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms