RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MST1LQ2TV78 715 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 C6orf52Q5T4I8 152 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 UEVLDQ8IX04 471 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 HIPK4Q8NE63 616 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 STON2Q8WXE9 905 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 TAAR8Q969N4 342 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 LRR1Q96L50 414 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 ANKRD27Q96NW4 1050 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 ASPNQ9BXN1 380 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 RAB1BQ9H0U4 201 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 B3GAT2Q9NPZ5 323 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 SLC25A37Q9NYZ2 338 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 VAPAQ9P0L0 249 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 TRIM33Q9UPN9 1127 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 USP22Q9UPT9 525 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 NOX1Q9Y5S8 564 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 A0A096LNT2 108 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 A0A096LPE4 126 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 A0A1W2PPZ6 126 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF726A6NNF4 738 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 M0R082 166 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 NR5A2O00482 541 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 GPRIN2O60269 458 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 FMO6PO60774 539 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ENTPD5O75356 428 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 C8BP07358 591 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 OR4A8P0C604 315 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 FAM157CP0CG43 387 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 GRPRP30550 384 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 PPOXP50336 477 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 RGS8P57771 180 aaPredicted RBP10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ARF1P84077 181 aaKnown RBP10.84□□□□□ -0.67
COL6A1-205ENST00000492851 RBBP4Q09028 425 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 AGKQ53H12 422 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 SLC46A3Q7Z3Q1 461 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ARMC8Q8IUR7 673 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 SLC30A8Q8IWU4 369 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF417Q8TAU3 575 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 RNF217Q8TC41 542 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 SLC41A3Q96GZ6 507 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ATP6V1G3Q96LB4 118 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
COL6A1-205ENST00000492851 VRK1Q99986 396 aaPredicted RBP10.84□□□□□ -0.67
COL6A1-205ENST00000492851 TMEM43Q9BTV4 400 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 BEX2Q9BXY8 128 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 DENND2DQ9H6A0 471 aaPredicted RBP10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF442Q9H7R0 627 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 CRLF2Q9HC73 371 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 SLAMF8Q9P0V8 285 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 B3GAT1Q9P2W7 334 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.84□□□□□ -0.67
COL6A1-205ENST00000492851 LEF1Q9UJU2 399 aaPredicted RBP10.84□□□□□ -0.67
COL6A1-205ENST00000492851 ANGPT4Q9Y264 503 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 NDUFAF1Q9Y375 327 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 SPEF1Q9Y4P9 236 aa10.84□□□□□ -0.67
COL6A1-205ENST00000492851 TRBV5-3A0A0A0MS03 114 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 ZNF99A8MXY4 864 aaPredicted RBP10.83□□□□□ -0.68
COL6A1-205ENST00000492851 MT-ATP6P00846 226 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 CECR9P0C854 216 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 NPR2P20594 1047 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 HTR2AP28223 471 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 THBS2P35442 1172 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 PMS2P3Q13401 168 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 OR1Q1Q15612 314 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 ADIPOQQ15848 244 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 CEACAM16Q2WEN9 425 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 RUNDC3AQ59EK9 446 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 PAGE3Q5JUK9 113 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 ZNF613Q6PF04 617 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 LINGO2Q7L985 606 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 PXKQ7Z7A4 578 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 MSRB3Q8IXL7 192 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 C11orf65Q8NCR3 313 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 TSPEARQ8WU66 669 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 NEU4Q8WWR8 484 aaPredicted RBP10.83□□□□□ -0.68
COL6A1-205ENST00000492851 NANOS1Q8WY41 292 aaKnown RBP10.83□□□□□ -0.68
COL6A1-205ENST00000492851 TMEM158Q8WZ71 300 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 OR2M2Q96R28 347 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 EBF4Q9BQW3 602 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 SIKE1Q9BRV8 207 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 PLK3Q9H4B4 646 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 SLCO1B3Q9NPD5 702 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 SLC52A3Q9NQ40 469 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 MRGBPQ9NV56 204 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 MRPL39Q9NYK5 338 aaKnown RBP10.83□□□□□ -0.68
COL6A1-205ENST00000492851 KLHL14Q9P2G3 628 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 FBXL3Q9UKT7 428 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 JMJD1CQ15652 2540 aa10.83□□□□□ -0.68
COL6A1-205ENST00000492851 A0A0B4J2E0 115 aa10.82□□□□□ -0.68
COL6A1-205ENST00000492851 A0A1B0GX12 115 aa10.82□□□□□ -0.68
COL6A1-205ENST00000492851 MS4A18H0YCH9 400 aa10.82□□□□□ -0.68
COL6A1-205ENST00000492851 ANGPT2O15123 496 aa10.82□□□□□ -0.68
COL6A1-205ENST00000492851 TPST1O60507 370 aa10.82□□□□□ -0.68
COL6A1-205ENST00000492851 MFN2O95140 757 aa10.82□□□□□ -0.68
COL6A1-205ENST00000492851 OR6A2O95222 327 aa10.82□□□□□ -0.68
COL6A1-205ENST00000492851 NR4A2P43354 598 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms