RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MEAF6Q9HAF1 191 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 SLC7A10Q9NS82 523 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 TMEM45AQ9NWC5 275 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 FKBP7Q9Y680 259 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 ATP23Q9Y6H3 246 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 LOC390937A0A1W2PQ73 354 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 TMEM72A0PK05 275 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 WDR91A4D1P6 747 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 CDHR4A6H8M9 788 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 CCDC154A6NI56 674 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 LIPT2A6NK58 231 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 A8MVM7 634 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 VSTM5A8MXK1 200 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 J3KRW8 73 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 ST8SIA5O15466 376 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 ITM2AO43736 263 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 BCAS1O75363 584 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-212ENST00000492407 IL6P05231 212 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 ZCCHC18P0CG32 403 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 CREB1P16220 341 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 CXCR1P25024 350 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 SLC1A6P48664 564 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 HSPA13P48723 471 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 PDLIM4P50479 330 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 COPZ1P61923 177 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 POLR2GP62487 172 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-212ENST00000492407 LSM11P83369 360 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-212ENST00000492407 CHI3L2Q15782 390 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 MST1LQ2TV78 715 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 FAM174BQ3ZCQ3 159 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 SPANXN4Q5MJ08 99 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 OTUD3Q5T2D3 398 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-212ENST00000492407 TSPO2Q5TGU0 170 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 WBP2NLQ6ICG8 309 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 B3GLCTQ6Y288 498 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 AAED1Q7RTV5 226 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 CROCCP2Q86T23 111 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 ANKRD46Q86W74 232 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 RNF130Q86XS8 419 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 PHC2Q8IXK0 858 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 ZNF525Q8N782 197 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 ANKFN1Q8N957 763 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 ZIC4Q8N9L1 334 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 OR9K2Q8NGE7 335 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 SORT1Q99523 831 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 KATNB1Q9BVA0 655 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 TAPBPLQ9BX59 468 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 LINC00470Q9BZP3 86 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 YIPF3Q9GZM5 350 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 SHARPINQ9H0F6 387 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 REV1Q9UBZ9 1251 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 RASD1Q9Y272 281 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 FAM32AQ9Y421 112 aaKnown RBP7.98□□□□□ -1.13
HDAC3-212ENST00000492407 DSPPQ9NZW4 1301 aa7.98□□□□□ -1.13
HDAC3-212ENST00000492407 CLDN24A6NM45 220 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 TRPC5OSA6NMA1 111 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 B9A039 149 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 SLCO1B7G3V0H7 640 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 L7N2F9 121 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 AP3D1O14617 1153 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 RGS16O15492 202 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-212ENST00000492407 PHF1O43189 567 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-212ENST00000492407 LMX1BO60663 402 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 NPIPB7O75200 414 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 CRYAAP02489 173 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 PGRP06401 933 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 CHRM4P08173 479 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 TFPTP0C1Z6 253 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 IGHV4-31P0DP07 118 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 NR2F1P10589 423 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 CCNA2P20248 432 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 PTNP21246 168 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 SERPINF1P36955 418 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 FOXG1P55316 489 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-212ENST00000492407 SNRPD2P62316 118 aaKnown RBP7.97□□□□□ -1.13
HDAC3-212ENST00000492407 VSNL1P62760 191 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 SPOCK1Q08629 439 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 STX3Q13277 289 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 EFNB3Q15768 340 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 SYPL1Q16563 259 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 LIN52Q52LA3 116 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 MRPL2Q5T653 305 aaKnown RBP7.97□□□□□ -1.13
HDAC3-212ENST00000492407 RNF220Q5VTB9 566 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 TMEM225Q6GV28 225 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 UGT2A3Q6UWM9 527 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 ZNF621Q6ZSS3 439 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 MSANTD1Q6ZTZ1 278 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 OLIG3Q7RTU3 272 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 CCDC36Q8IYA8 594 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 IL17RDQ8NFM7 739 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 OR4F15Q8NGB8 312 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 STK35Q8TDR2 534 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 STON2Q8WXE9 905 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 SLC38A2Q96QD8 506 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 OR52E6Q96RD3 313 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 ZBTB18Q99592 522 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 PIMREGQ9BSJ6 248 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 AIG1Q9NVV5 245 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 P2RX2Q9UBL9 471 aa7.97□□□□□ -1.13
HDAC3-212ENST00000492407 IFT52Q9Y366 437 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms