RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 GXYLT2A0PJZ3 443 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 REM1O75628 298 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ACP2P11117 423 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 SLC2A2P11168 524 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 NAGAP17050 411 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 MAGEA5P43359 124 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 KIR2DL3P43628 341 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 MAP2K3P46734 347 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 PLGLB1Q02325 96 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 KLHL22Q53GT1 634 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 PAQR6Q6TCH4 344 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 DEF8Q6ZN54 512 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 NUP54Q7Z3B4 507 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 NATD1Q8N6N6 113 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ATP6V1C2Q8NEY4 427 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 HOXB13Q92826 284 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 TMEM203Q969S6 136 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 NEURL3Q96EH8 262 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 C1GALT1C1Q96EU7 318 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 OTUB1Q96FW1 271 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ZC3HAV1LQ96H79 300 aaKnown RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 TMEM19Q96HH6 336 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF607Q96SK3 696 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ADOQ96SZ5 270 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 YIPF4Q9BSR8 244 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 TRAF4Q9BUZ4 470 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 BEX2Q9BXY8 128 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ANGPTL4Q9BY76 406 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 RERGLQ9H628 205 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 NEUROD4Q9HD90 331 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ING3Q9NXR8 418 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 FLRT3Q9NZU0 649 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 LIPGQ9Y5X9 500 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 COL12A1Q99715 3063 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 HIVEP3Q5T1R4 2406 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF407Q9C0G0 2248 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 A0A0B4J293 547 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 C17orf51A8MQB3 221 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 TP53I11O14683 189 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 PLA2G10O15496 165 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 EMC8O43402 210 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 IGKV1D-16P01601 117 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 IGFBP1P08833 259 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 HYAL4Q2M3T9 481 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 KRTCAP3Q53RY4 240 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 SYT14P1Q58G82 188 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 EXOSC6Q5RKV6 272 aaKnown RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 C1QL3Q5VWW1 255 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 TNFAIP8L2Q6P589 184 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 METAP1DQ6UB28 335 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF730Q6ZMV8 503 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 LINC00471Q8N535 108 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 GPR32P1Q8NGA4 272 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 OR5P2Q8WZ92 322 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 UFD1Q92890 307 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 SLC35A4Q96G79 324 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 LRR1Q96L50 414 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 KATNB1Q9BVA0 655 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 NIPAL2Q9H841 368 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ZDHHC11Q9H8X9 412 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 GALNT9Q9HCQ5 603 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 DIABLOQ9NR28 239 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 PLSCR2Q9NRY7 297 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 RBFOX1Q9NWB1 397 aaKnown RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 TESQ9UGI8 421 aaKnown RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF835Q9Y2P0 537 aa8.51□□□□□ -1.05
BRCA1-219ENST00000491747 UTP20O75691 2785 aaKnown RBP8.51□□□□□ -1.05
BRCA1-219ENST00000491747 A0A1B0GTH9 108 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 TMEM129A0AVI4 362 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ADAM10O14672 748 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 PRKYO43930 277 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 CDC40O60508 579 aaKnown RBP eCLIP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ICOSLGO75144 302 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 HLA-DQB1P01920 261 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 PSKH1P11801 424 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 GABRA5P31644 462 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 GABRA3P34903 492 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 GZMKP49863 264 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 Q5BKY6 102 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 SZRD1Q7Z422 152 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 BCDIN3DQ7Z5W3 292 aaKnown RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 UBE2J2Q8N2K1 259 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 CADM2Q8N3J6 435 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 Q8N402 240 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 YIPF7Q8N8F6 280 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 SLC16A11Q8NCK7 471 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ANGPTL6Q8NI99 470 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 SLC7A13Q8TCU3 470 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 MED30Q96HR3 178 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 JSRP1Q96MG2 331 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 SECISBP2Q96T21 854 aaKnown RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ISYNA1Q9NPH2 558 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ACAD8Q9UKU7 415 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 CBLCQ9ULV8 474 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 FAM240BA0A1B0GVZ2 78 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms