RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ISG20L2Q9H9L3 353 aaKnown RBP12.53□□□□□ -0.4
SMPD4-219ENST00000491128 TNFRSF10DQ9UBN6 386 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 APC2O95996 2303 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 CACNA1GO43497 2377 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 FREM3P0C091 2139 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 PSMD9O00233 223 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 DLL1O00548 723 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 PLPP3O14495 311 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 SNPHO15079 494 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 OR6A2O95222 327 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 LIMS3P0CW19 117 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 LIMS4P0CW20 117 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 PIPP12273 146 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-219ENST00000491128 PAICSP22234 425 aaKnown RBP12.53□□□□□ -0.4
SMPD4-219ENST00000491128 TGFBR2P37173 567 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 STARP49675 285 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 SUMO3P55854 103 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-219ENST00000491128 NCS1P62166 190 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 OR1C1Q15619 314 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 ACKR1Q16570 336 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 BORAQ6PGQ7 559 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 PLXDC2Q6UX71 529 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 ARMC10Q8N2F6 343 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 ZNF511Q8NB15 262 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 SYT14Q8NB59 555 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 RFKQ969G6 155 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 TMEM203Q969S6 136 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 TXNDC15Q96J42 360 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 MRGPRX4Q96LA9 322 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 SGCZQ96LD1 299 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 CCNL2Q96S94 520 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-219ENST00000491128 TUBA1CQ9BQE3 449 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 SACM1LQ9NTJ5 587 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 PTPRBP23467 1997 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 LOC100506127A0A0U1RQW1 187 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 OR2M5A3KFT3 312 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 C12orf71A8MTZ7 269 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-219ENST00000491128 MS4A18H0YCH9 400 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 MYL12BO14950 172 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 LALBAP00709 142 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 CELA3AP09093 270 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-219ENST00000491128 RAB40BQ12829 278 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.4
SMPD4-219ENST00000491128 SPCS2Q15005 226 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 MS4A18Q3C1V0 323 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 WIPI1Q5MNZ9 446 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-219ENST00000491128 B3GNT6Q6ZMB0 384 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 LIPHQ8WWY8 451 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 DDIT4LQ96D03 193 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 FAM210AQ96ND0 272 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 OR51E2Q9H255 320 aa12.52□□□□□ -0.4
SMPD4-219ENST00000491128 DIMT1Q9UNQ2 313 aaKnown RBP12.52□□□□□ -0.4
SMPD4-219ENST00000491128 TVP23AA6NH52 213 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 LRRC3CA6NJW4 275 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 SLC30A4O14863 429 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 SELENOFO60613 162 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 IFNGP01579 166 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 GADD45AP24522 165 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 GTF2E2P29084 291 aaKnown RBP12.52□□□□□ -0.41
SMPD4-219ENST00000491128 SPHARQ15513 63 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 ETFDHQ16134 617 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 KLHL22Q53GT1 634 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 LIPKQ5VXJ0 399 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 SSX6Q7RTT6 188 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 NANOGP1Q8N7R0 232 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 OR14L1PQ8NHC6 308 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 TM9SF4Q92544 642 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-219ENST00000491128 YIPF6Q96EC8 236 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 TEKT2Q9UIF3 430 aa12.52□□□□□ -0.41
SMPD4-219ENST00000491128 LIPT2A6NK58 231 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SNTNA6NMZ2 147 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 FAM166BA8MTA8 275 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SEC14L5O43304 696 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 TRMUO75648 421 aaKnown RBP12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SPI1P17947 270 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 MYL12AP19105 171 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SLC2A5P22732 501 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SDHAP31040 664 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 ACVR1BP36896 505 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 OR2B6P58173 313 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-219ENST00000491128 TLE3Q04726 772 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 KRR1Q13601 381 aaKnown RBP12.51□□□□□ -0.41
SMPD4-219ENST00000491128 SGCBQ16585 318 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 CTF1Q16619 201 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 C3orf33Q6P1S2 294 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 NDNFQ8TB73 568 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 STK35Q8TDR2 534 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 NXPE2Q96DL1 559 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 OPALINQ96PE5 141 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 UTP23Q9BRU9 249 aaKnown RBP12.51□□□□□ -0.41
SMPD4-219ENST00000491128 ASPNQ9BXN1 380 aa12.51□□□□□ -0.41
SMPD4-219ENST00000491128 INIPQ9NRY2 104 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms